Paraburkholderia atlantica CCGE1002: BC1002_5351
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Entry
BC1002_5351 CDS
T01217
Name
(GenBank) L-seryl-tRNA selenium transferase
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
bge
Paraburkholderia atlantica CCGE1002
Pathway
bge00450
Selenocompound metabolism
bge00970
Aminoacyl-tRNA biosynthesis
bge01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
BC1002_5351
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BC1002_5351
Enzymes [BR:
bge01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
BC1002_5351
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Gene cluster
GFIT
Motif
Pfam:
SelA
Se-cys_synth_N
Aminotran_5
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ADG19287
UniProt:
D5WFD3
LinkDB
All DBs
Position
2:2343800..2345248
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AA seq
482 aa
AA seq
DB search
MSDVSNSELRALMARVPSVDKVMASAEFAPLIGEYGRTQVLNALRDALDAWRIGAQSGDA
AADPAVSALDTSQLHATVAAALLARNASRLRSVFNLTGTVLHTNLGRALLPDESVRAVMT
ALTQPANLEFDLATGKRGDRDDLIDDLICELTGAEAATIVNNNAAAVLLTLSALAAKKEV
VVSRGELVEIGGAFRIPDIMNRAGAKLREVGTTNRTHLKDYEQAINARTALLMKVHASNY
AISGFTKEVGIDEIAPLAHEHGLAVAVDLGSGTLVDLAEWGLPREPTVRETVADGADVVT
FSGDKLLGGPQAGLIVGRRELIAKIKKHPLKRALRVGKLTLAALEPVLRLYRAPEKLADR
LTTLRLLTRPAEDIHGAAQRVLPALQQAIDARYTVAAEPMFSQIGSGALPVEVLPSYGLV
IRMSDGKRGGRHLLALEKQLREMARPVIGRIADDALRLDLRCLEAADEAQLIAQLIAQPQ
SN
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatgtgagcaactcggaattgcgcgcgctgatggcgcgcgtgccgtcggtggac
aaggtgatggcgtcggcggaattcgcgccgctgatcggcgaatacggccgcactcaggtg
ctcaatgcgctgcgcgacgcgctcgacgcgtggcgtatcggcgcgcaatcgggcgatgcg
gcggccgacccggcggtgagcgcgctcgatacctcgcaactgcatgcgacggtcgccgcg
gcgctgctcgcacgcaacgcgtcgcggctgcgcagcgtattcaatctgaccggcaccgta
ttgcacacgaacctcggccgcgcgctgctgcccgacgagtcggtgcgcgccgtgatgact
gcgctcacgcaacccgccaacctcgagttcgatctcgccaccggcaagcgcggcgaccgc
gacgacctgatcgacgatctgatctgcgagctgaccggcgccgaagccgcgaccatcgtc
aacaacaacgcggccgcggtgctgctcacgctgtccgcgctcgccgcgaaaaaggaagtg
gtggtgtcgcgcggcgaactcgtcgaaatcggcggcgcgtttcgcattcccgacatcatg
aatcgcgcaggcgcgaagctgcgcgaagtcggcacgacgaaccgcacgcatctgaaggac
tatgaacaggcgatcaacgcgcgcactgcactgctgatgaaagtccacgcgagcaactac
gcgatcagcggcttcacgaaggaagtcggcatcgacgagatcgcaccgctcgcgcatgag
cacgggctcgcggtcgccgtcgatctcggcagcggcacgctggtcgatctcgccgaatgg
ggcttgccgcgtgagccgacggtgcgcgagacggtcgcggacggcgccgatgtcgtcacg
ttcagcggcgacaagctgctcggcggcccccaggccggattgatcgtcggacggcgcgag
ctgatcgcgaagatcaagaagcatccgttaaagcgcgcactgcgggtcggcaagctgacg
ctcgcggcgctggagccggtgctgcggttgtatcgcgcgccggagaaattggccgaccgg
ctgaccacgctacggctcctcacgcggcccgccgaggatattcacggcgccgctcagcgt
gtcctgcccgcgcttcagcaggcgatcgatgcgcgctacacggtggccgccgagccgatg
ttcagccagatcggcagcggcgcattgccggtcgaggtgctaccaagctatggcctcgtg
atccggatgagcgacggcaaacgcggcggccgccatctgctcgcgctggaaaagcagttg
cgcgagatggcgcggccggtgatcggccggatcgccgacgacgcgttgcggctcgatctg
cgctgcctcgaagctgccgacgaagcgcaattgatcgctcagctcatcgcgcaaccgcaa
agcaactga
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