Paraburkholderia atlantica CCGE1002: BC1002_5476
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Entry
BC1002_5476 CDS
T01217
Name
(GenBank) transcriptional regulator, Crp/Fnr family
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
bge
Paraburkholderia atlantica CCGE1002
Pathway
bge02020
Two-component system
bge02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BC1002_5476
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BC1002_5476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bge03000
]
BC1002_5476
Transcription factors [BR:
bge03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
BC1002_5476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
GntR
MarR
LacI
TrmB
HTH_24
Phage_rep_O
Motif
Other DBs
NCBI-ProteinID:
ADG19402
UniProt:
D5WG26
LinkDB
All DBs
Position
2:complement(2489359..2490201)
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AA seq
280 aa
AA seq
DB search
MPSLDAHIVLRACVSKLQLREMSTEEERINGGPLKAIDLLKQQKLLRNVANEVIEETSRH
IRYRRFSKREFVVHKGDAGSSLLMLMSGRLQVIALSEDGREVGLDFVEPGDYFGELSIID
GGPRSASIIAITESVVGFLPKHQAQALFYRNPAVVEALLQRLCRTIRQASNYRSMLGLTR
AYARVYSVLEASMRTSAGGLLTIENLPNQQAIAIMANVSRETVSRAIRSLIDGEVIERDY
RRLIVRNAEMLAKLARGEAELQLRAKAMGEGATVGQSRPS
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgctcgatgcgcatatcgtcctacgtgcctgtgtcagcaaattacaattgaga
gagatgtcgaccgaagaagaaaggatcaatggcggcccattaaaggccatcgatctcttg
aaacaacaaaagctgctacgcaacgtcgcgaacgaagtcattgaagagaccagccgccac
attcgctatcgccgcttctcaaagcgggaattcgtcgttcataagggcgatgctggttca
tctctactaatgttgatgtccggccgcctgcaggtgatcgcactgtcggaagatggccgc
gaggtgggactcgatttcgtcgagccgggtgactattttggcgagctatcgattatcgac
ggcggtcctcgctcggcttcgatcattgcgatcacggaatcagtggtcggctttttgccg
aagcatcaggcgcaagcgctgttttaccgtaatcccgcagtggtggaggcgctgttgcaa
cgactgtgccgcacgattcgccaggcttcgaattaccggtcgatgctgggtctgacgcgc
gcttacgccagggtctattcagtgcttgaggcttccatgagaacgagtgcaggcggcctg
ttgacaatcgagaatctacccaaccagcaggccattgcgatcatggccaacgtgagccgc
gaaacagtatcgcgcgcgatccgctctcttatcgacggagaggtgatcgaacgtgactat
cgacgcctgatcgttcgcaatgcggaaatgcttgccaagcttgcgaggggcgaggctgag
ctgcaactgcgtgcgaaggcgatgggcgaaggcgctaccgtcgggcaatcgcgcccctcc
tga
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