Paraburkholderia atlantica CCGE1002: BC1002_5495
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Entry
BC1002_5495 CDS
T01217
Name
(GenBank) transcriptional regulator, Crp/Fnr family
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
bge
Paraburkholderia atlantica CCGE1002
Pathway
bge02020
Two-component system
bge02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BC1002_5495
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BC1002_5495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bge03000
]
BC1002_5495
Transcription factors [BR:
bge03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
BC1002_5495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
MarR
MarR_2
HVO_A0261_N
GntR
TrmB
Crp
LacI
HTH_36
HTH_IclR
HTH_29
HTH_24
DUF7343
HTH_11
Phage_rep_O
PhyR_sigma2
HTH_TbsP_C
DUF5830
Rrf2
DUF5817_CT
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
ADG19421
UniProt:
D5WG45
LinkDB
All DBs
Position
2:complement(2517242..2517910)
Genome browser
AA seq
222 aa
AA seq
DB search
MLRKQILLREARSDLVGNTTRLTKVVHIEEGDHICYQGAIESPLIFLVEGQLRVSTYSED
GVELLLYVVNPDECTGEISILNCAPTLGNIIATKRSTVGLLDRAHARRLLSDPDVARSLN
KLIAGRAKGLIVARSSRSQPRADARVTAVIEAAINQSASFDSSLVELPNQVTIAAMAGVS
RETVSRVITSLEKRGIVERESKAIRIRDRVALHHLATGRTPS
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgttgagaaagcaaattctgcttcgcgaggcgcgaagcgacttagtcggcaacacgacc
aggctcaccaaggttgtacacatcgaggagggcgatcacatttgctatcagggggccata
gagtcgccgctgatcttcctcgtcgagggacagctccgtgtgtcgacatactccgaggat
ggtgtcgagctcctgctctacgttgtcaatcccgacgagtgtacgggcgagatttcgatc
ctcaactgcgcgccgaccttgggcaatatcattgctacgaagcgcagtaccgtcggtctg
ctcgaccgggcgcacgcccgccggctcctcagcgacccggacgtggcgcgctcgctgaat
aaactgatcgcggggcgcgccaaagggctgatcgtggcgcgcagctcgcgaagccagccg
cgtgcggatgcgcgtgtgaccgcagtgatcgaggcagccatcaaccagagtgcgtccttc
gattcatcgctagtcgaactgcccaatcaggtcacgattgcagcgatggcgggcgtgagc
cgcgagacggtgtcgcgtgtgatcacgtcgctcgaaaagcgtgggattgtcgaacgggaa
agcaaggcgatccgcattcgggatcgtgtcgcgttgcaccacctcgcaaccggccgaacg
ccaagttga
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