Paraburkholderia atlantica CCGE1002: BC1002_6008
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Entry
BC1002_6008 CDS
T01217
Name
(GenBank) binding-protein-dependent transport systems inner membrane component
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
bge
Paraburkholderia atlantica CCGE1002
Pathway
bge02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BC1002_6008
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bge02000
]
BC1002_6008
Transporters [BR:
bge02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
BC1002_6008
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ADG19879
UniProt:
D5WKY3
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All DBs
Position
3:463989..465245
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AA seq
418 aa
AA seq
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MNTPLPSTAPFGRGPQAANRESFRAARRKAAMRALLLALPLLIFLLVTFVAPIASLLARS
VRNPEVRTGMPQLSAALAGWDGAGLPGEPAFAALAHDLKDASESGQLGNIARRMNFYQPE
FRSLLFKTARATRSEMPAQWKPALIDLDERWNAPETWRLLKRASISPTPDYLLNAVDAQV
APDGSVTSVAADSAIFRAAFGRTVTISATVTLLCLVLGYPVAYLLATLPENQSNRLILFV
IVPFWTSLLVRTTAWYVLLQPGGVINSALLRFGIINHPLPLIFNRTGVLIGMTHILLPYM
ILAIFSVMKGVPSVYMRAAKSLGAHPAVAFVRVYIPQTLPGVGAGCFLVFVLALGYYITP
ALLGGAGDEMISQLIASQTNDQLNWGLAGALSCYLIAFTAVFYFIFNRLVGIDRLRFG
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgccgctgccatccaccgcccctttcggccgcggcccgcaggccgcgaaccgc
gagtcgttcagggccgcgcgccgcaaagccgcgatgcgcgcattgctgctggctttgccg
ttgctgatctttctgctggtgacgttcgtcgcaccgatcgcaagcctgctcgcgcgcagt
gtgcgaaatcctgaagtgcgcaccggtatgccgcagttgagcgcagcactggccggatgg
gacggcgcgggcttgcccggcgaaccggccttcgccgcactcgcgcacgacctgaaggac
gccagcgaatccggccagctcggcaatatcgcgcggcgcatgaacttctatcaaccggag
ttccgcagcctgctgttcaagacggcgcgcgccacacgttcggaaatgcccgcgcaatgg
aaacccgcgctgatcgatctcgatgaacgctggaacgcgccggaaacctggcgcctgctc
aagcgtgcgtcgatctcgcccacccccgactatttgctgaacgccgtcgacgcgcaagtc
gcacctgacggctcggtgacgtccgtcgcggcggacagtgccatcttccgcgcggcgttc
gggcgcacggtcaccatcagtgcgacggtcacgctgctgtgcctggtgctgggctacccg
gtggcgtatctgctcgcgacgctgccggagaaccagagtaaccggctgattctgttcgtg
atcgtgccgttctggacatcgctgctggtgcgcaccaccgcgtggtatgtgctgctgcaa
cccggtggcgtgatcaatagcgcgttgctccgcttcggcatcatcaatcatccgctgccg
ctgattttcaatcgcacgggtgtgctgatcggcatgacgcacatcctgctgccctacatg
atcctcgcgatcttttcggtcatgaaaggcgtcccgtccgtttacatgcgcgcggcgaag
tcccttggcgcgcatccggccgtggccttcgtgcgcgtctatattccgcagacgctgccg
ggtgtcggcgcgggatgttttctcgtgttcgtgctcgcgctcggttattacatcaccccc
gccctgctaggcggcgccggcgacgaaatgatcagccagctgatcgcgtcgcagaccaac
gatcagctcaactggggactcgcgggtgcgctgtcgtgctatctgatcgcattcacagcg
gtgttctatttcatcttcaaccggctggtcggtatcgaccgcttgcgcttcggctaa
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