Paraburkholderia atlantica CCGE1002: BC1002_6024
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Entry
BC1002_6024 CDS
T01217
Name
(GenBank) ABC transporter related protein
KO
K01995
branched-chain amino acid transport system ATP-binding protein
K01998
branched-chain amino acid transport system permease protein
Organism
bge
Paraburkholderia atlantica CCGE1002
Pathway
bge02010
ABC transporters
bge02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BC1002_6024
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BC1002_6024
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bge02000
]
BC1002_6024
Transporters [BR:
bge02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
BC1002_6024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
ABC_tran
BCA_ABC_TP_C
AAA_21
AAA_23
AAA_30
AAA_16
AAA_29
ABC_ATPase
Motif
Other DBs
NCBI-ProteinID:
ADG19894
UniProt:
D5WKZ8
LinkDB
All DBs
Position
3:477454..479262
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AA seq
602 aa
AA seq
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MSARQASARWARPVGAALLAAAVALPAVASNYVIDVGLTIVTYSILGLGLNIVVGYAGLL
DLGYAAFFAIGAYTTALLETLLQFSFWETLPFSLAFAAVSGIVIGYPTLRLRSDYLAIVT
LGFGEITRIVATNLDITGGPNGIFGIASPSLFGFEISSPQALYELGMAFLVVVLVFAIRL
GQSRLGRAWTSIREDEAAAEAVGVPTLRVKLLAYVMGALIGGLGGSLFAARFGTIDPTGF
TYLQSVTILIVVVLGGRGSIPGVLLGAIIVAGLPEILRFLNLWRIFAFAIGLVILMLLRP
QGLWPVPLRRVAPARKGADADRAPVPSHAVTDETLLEVRDMQRRFGGVLAVGGVSFVVRS
GEIVSLIGPNGAGKTTVFNCLTGVIRPTGGQIVWCGERLAGGAPHRIVHQGMARTFQGIR
LFGHMTAFENVLTGMDHRLRTPLAAELLALPSARAEAADHSTEGLRWLAFVGLAGRSGER
AADLPYGDQRRLEIARALASSPRLLLLDEPAAGMNPTEKRALMELIRRIRDHGVTVLLIE
HDMMLVMGVSDRIIVMDHGVIIAEGPPAAIQADPHVIDAYLGTAEKDEASDDTAGEKSLW
DS
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcccgtcaggcttccgcgcgttgggccaggccagtcggcgcggcgctactggcc
gccgccgtggcgctgcccgccgtcgccagcaactatgtcatcgatgtcggcctgaccatc
gtcacctattcgatcctgggtcttgggctgaacatcgtcgtcggctatgcgggcctgctc
gatctgggctacgcggccttcttcgcgatcggcgcgtacacgacagcgttgctggaaacc
ctgctgcagttctcgttctgggaaacgctgccgttcagtctggcgttcgccgcggtatcg
ggcatcgtcatcggctatcccacgctgcgcctgcgcagcgattacctggcgatcgtcacg
ctggggttcggcgaaattacgcgtatcgtcgccaccaatctcgacatcacgggcggcccg
aacggcatcttcggcatcgcgagtccgagcctgttcggcttcgagatcagttcgccgcaa
gcgctctacgaactgggcatggcgttcctcgtggtggtgctggtgttcgcgatccggctc
ggccagtcacggctgggccgcgcctggaccagcatccgcgaggacgaggcggctgccgag
gctgtcggcgtgccgacgctgcgcgtcaagctgctcgcctatgtgatgggcgcgttgatc
ggcggcctgggcggcagcctgttcgccgcccgcttcggcaccatcgatccgaccggcttc
acatatctgcagtccgtcacgattttgatcgtcgtcgtgctcggcggccgcggcagcatt
cccggcgtgctcctcggcgccatcatcgtcgccggcctgccggagatactgcgttttctg
aacctgtggcgcatcttcgctttcgcgatcgggctcgtgatcctgatgctgctaaggccg
cagggcttgtggccagtgccgttgcgccgcgtcgcgccggcgcgcaagggcgctgacgcc
gatcgggctcccgtgcccagccacgccgtcaccgatgagaccctgctggaggtgcgcgac
atgcagcgccgcttcggcggcgtgctggcggtcggcggtgtcagcttcgtggtgcggagc
ggcgagatcgtcagcctgatcggtccgaacggcgccggcaagacgaccgtgttcaactgc
ctgaccggcgtgatccgcccgactggcggccagatcgtctggtgcggggaacggcttgcc
ggcggcgcgcctcatcgcatcgtccatcaaggcatggcgcgcaccttccagggcatccgc
ctgttcggccatatgactgccttcgaaaacgtgctgaccggcatggatcatcggcttcgg
acgccgctcgcagccgagcttctggcgctgccgtccgcgcgcgccgaggcggccgaccat
tccaccgagggcctgcgctggctcgccttcgtcggtcttgccggcaggtccggcgagcgc
gccgccgatctgccctacggcgaccaacgcagactggagatcgcccgtgcgctcgccagc
agccctcgcctgctgctgctcgacgagccggcggcgggcatgaacccgacagagaaacgc
gcgctgatggaactgatccggcgaatccgggatcacggcgtgacggtgctgttgatcgag
cacgacatgatgctggtgatgggcgtgtcggaccggatcatcgtgatggatcacggcgtc
atcatcgccgagggcccgcccgccgcgatccaggcggacccacatgtgatcgatgcctat
ctcggcacagccgaaaaggacgaggcgagcgacgataccgccggggagaaatcgctgtgg
gactcctag
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