Paraburkholderia atlantica CCGE1002: BC1002_6084
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Entry
BC1002_6084 CDS
T01217
Name
(GenBank) transcriptional regulator, TetR family
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
bge
Paraburkholderia atlantica CCGE1002
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bge03000
]
BC1002_6084
Transcription factors [BR:
bge03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
BC1002_6084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_11
HTH_32
TetR_C_24
HTH_11
HTH_22
DUF5132
Dppa2_A
HTH_36
Motif
Other DBs
NCBI-ProteinID:
ADG19950
UniProt:
D5WL54
LinkDB
All DBs
Position
3:539735..540349
Genome browser
AA seq
204 aa
AA seq
DB search
MESPARPQRLTDRKRVAIVTAAIEEFLAAGYDATSMDRIAARASVSKRTVYNHFPSKEAL
FAAILQQLWDASHDGDAPSYLADQPLRGQLLDLLERKLRLLHDESFLSLARVAIAAGIHS
PERARDMVARMGEREEDLTAWVRAAAADGRIKTEDPVFAALQLQGLVKAFAFWPQVAMGQ
VPLDAGEQKRIAEAAADMFLARYA
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgcctgcccgcccccaacgtctgactgaccgaaagcgcgtcgcgatcgtcacc
gccgcgatcgaggagttcctcgcggccggctacgacgcaaccagcatggaccgcatcgcc
gcccgcgcgagcgtctcgaagcgcacggtctataaccatttcccgagcaaggaagcgctt
ttcgcggcgatcctccagcagctatgggacgcgagccacgacggcgatgcgccctcctac
ctcgccgatcaaccattgcgcgggcagttgctcgatctgctggagcgcaagctgaggctg
cttcacgacgaatcctttttgtcgctggcacgggtggcgatcgcggctggcatccattcg
ccggagcgcgcgcgcgatatggtcgctcgcatgggggagcgcgaggaggatctgacggca
tgggtccgggcggctgccgcggacggccgcatcaagaccgaggaccccgtcttcgccgca
ctgcagttgcaggggctcgtgaaggctttcgccttctggccgcaagtggcgatgggtcaa
gtgccgctcgatgccggcgagcagaagcggatcgcggaagcggcggcggatatgttcctc
gcgcgttatgcgtga
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integrated database retrieval system
