Paraburkholderia atlantica CCGE1002: BC1002_6248 Help Entry BC1002_6248       CDS       T01217                                  Name (GenBank) type VI secretion protein IcmF   KO K11891   type VI secretion system protein ImpL Organism bge  Paraburkholderia atlantica CCGE1002 Pathway bge03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:bge00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     BC1002_6248  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:bge02044]     BC1002_6248 Secretion system [BR:bge02044]  Type VI secretion system   Imp/Vas secretion system core components    BC1002_6248 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  IcmF-related_N IcmF-related IcmF_C Motif Other DBs NCBI-ProteinID:  ADG20108 UniProt:  D5WLL2 LinkDB All DBs Position 3:complement(709366..713331) Genome browser AA seq 1321 aa AA seqDB search MSYLNRLSKLVLTRQTLMLAAILVAAAAVWFVGPLIAFGDYRPLDSVLSRTLSVVVLLLL LLFWLLGWSPGVIGVALLCVALWYFGPILAFGETHPLGTTWSRVLLISVLLACYAIYELY RLWRAVRSDDVLLQRVLNPFTKKSAATPVARDEIRALHAIVAKAIDKLKRMRGGSAGLRR LLESQRYLYELPWYMVVGSPGAGKTTLILNSGLDFPEAEQMAAASLGSRIETENCDWWFA NEAVLIDTAGRYMVQDAASHDAAQVDVKPEDLKSANEAEWRGFLGLLRKRRPRAPINGAL LAVSVEELLTRPASERKALAASMRARLGELRQQLGIRFPVYVVVTKLDLLPGFGEYFQSL TAESRAQIFGFTLPYQEEPEQHGRDTLRLTCAAEMRELEQGLEDGINTRLQEVYEVDLRK KLYALPAEFRSLCAELNELLALVFLDSKYDDTQLNSTLRGVYFTSAAQTHEAVSADSTTL LQRLRRGLAGLFGAAPKTVSPSSGDATPTAYRGYFLRNLFQRVILAEAHLVRPNLYWEIR FRALRLVGHLLAIIIVVWLMGALVVSFGNNREYLAAIDGKANGLAARVSSQRKAPRAGAM GSILSASRDLPQFDGIDLDSPGLAWRYGLYTVPAISAAAGETYDGLLKQMLLPQVIGRLE TVLDTQIGAQAADGVYRTLTVYLMLFDRSQYDAKAIKAWVLGDWEHNNSVAPLGERSVMA RHLDALLGEGVPAVPAKPVNAQLVRRAREFLGRNPASGRLYERAMNAMAPEAPENVTLLS AAGPQATTVFMLADGSTLARGIPGLYTYDGYHAVFNQRLPEFLERARKQDAWVMGEADAS ARWRQMANGNALRKDRLADDIRRQYLTDYANYWSQFLDDVRPVSGSDGTLAPDLQTLRTL AAPDSPLARLARTAARETSLSVADGADEPSAAGSAINVITRRSQVARAASAVAATATIGQ LAQRKMERELVDRRFAALREVVTGQADSGSALPGGSGVLQLGGVIGLINEQYTRLMTAGD VLATNSMPPTDDLGSTMQFEAQKLPPPFRAVLVGLASQSIRKVDRNVGSLLTMQVESSVG AQCRRAVEGKYPFVASVQEVDIDDFNRVFAAGGLLDDFFHKTLASRVDTSIRPWRYKPVS PGMPPMQGPSLDPFERAAAIRQTFFRDPSATRMSWNAGLKVVSLDPEITDLLIDVDGQNL RYAHGPVATFPITWPGPRGGSMAGLTANPRVRPDTSTVMTAGPWALFRLIDRGLVTSTLS SSRSAVDFNFDDRHAVIELTSGGQSGPQLTALLRGFRCPGSGSALARRAEASSGSASADE L NT seq 3966 nt NT seq  +upstreamnt  +downstreamnt atgtcttatttgaaccgcttatcgaaacttgtgctgacgcgccagacgctgatgctcgcc gcgatcctcgtggcggctgcggccgtctggttcgtggggcctctgatcgcatttggcgac taccggccgctcgacagcgtgctctcgcgcacgctgtcagtcgtcgtgctgttgttgctg ctgctgttctggctgctcggctggtcgccgggtgtcatcggcgtcgcgttgctgtgtgtc gcgctctggtatttcggaccgatactcgcgttcggcgaaacgcatccgctcggcaccaca tggtcccgcgtgctgctgatctcggtgctgctcgcctgctatgcaatctatgagctgtac cgcctgtggcgggcagtgcgcagcgacgacgtgctgctgcagcgcgtcctgaatccgttc acgaagaagtcggcagcgacccctgttgcacgagacgaaatccgcgcgcttcacgcgatc gtcgcgaaggccatcgacaagctcaaacgcatgcgcggcgggtcggcggggctgcgtcgc ctgctcgaaagccagcgctatctgtacgaacttccgtggtacatggtcgtgggctcgccg ggtgcgggcaagacgacgttgatcctgaattcgggtctggattttccggaggcggagcag atggccgcggcgtcgcttggaagccgcatcgaaacggagaattgcgactggtggttcgcg aacgaggcggtgctgatcgataccgctggccgttatatggttcaggacgcagcatcgcat gacgccgcgcaggtcgacgtcaaaccggaagacctgaagagcgcgaacgaggccgaatgg cgcggctttctcgggctgcttcgcaagcggcgaccgcgcgcgccgatcaacggtgcgttg ctggccgtttcggtcgaagagttgttgacgcgcccagcgtccgaacgaaaggcgctcgcc gcgtcgatgcgcgcgcggcttggcgagttgcgccagcagttggggattcgattcccggtt tacgtagtcgtcacgaagctcgatctgctgcccggcttcggggagtatttccagtcgttg acggcggaaagtcgcgcgcagattttcggctttacactgccctatcaggaagagccggaa caacacggccgcgacacactgcgcctgacctgcgcggccgagatgcgtgagctggagcag ggactcgaagacggcatcaacaccaggctgcaagaggtgtacgaggtcgatctgcgcaag aagctttatgcgctgccggccgagtttcgcagcctgtgcgcggaactcaatgaattgctc gcgctggtgtttctcgattcgaaatacgacgacacgcagttgaacagcacattgcgcggc gtctatttcacgagcgcggcgcagactcacgaggccgtgtccgccgacagcaccacactg ttgcagcggctgcgccgcgggctcgcgggtttgttcggcgccgcgccgaaaaccgtctcg ccgtcgtccggcgacgctacgcctaccgcctatcgcggctacttcttgcgcaatctgttt cagcgcgtgatcctggccgaagcgcatctggtgcggccgaacctgtactgggaaatccgc ttccgcgcgttgcgtctggtcgggcatctgctcgcgatcatcatcgtggtgtggctgatg ggtgcgctggtcgtgagcttcggcaataaccgcgagtatcttgctgcgatcgacggcaag gccaatgggctcgccgctcgggtctcgtcgcaacgcaaggcgccgcgggccggggcgatg gggtcgatactttcagcgtcgcgtgacctgccgcagttcgacggcatcgacctcgacagt cccggtctcgcatggcgctacgggctgtacacggtgcccgccatcagcgccgccgccggc gagacctacgacggtctgctgaagcagatgctgctgccgcaagtcatcggccggctcgaa acggtgctcgatacgcaaatcggcgcacaggccgcggacggcgtttatcgcacgctgacg gtctacctgatgctgttcgatcgctcgcaatacgacgcgaaagcaatcaaggcatgggtg ctcggcgactgggagcacaacaacagcgtcgcaccgctcggcgagcgcagcgtgatggcg cgacacctcgacgcgctgctcggagaaggggtccccgcggtgccggcaaaaccggtgaat gcgcagctggtgcgtcgcgcgcgcgagttccttggccgcaatccggcgtccggacggctc tacgaacgtgcgatgaacgccatggcgccggaggcgcccgagaacgtcacgctgctgagc gccgcgggtccgcaggccactaccgtgttcatgctggccgacggctcgacgcttgcgcga ggcatccccggtctctatacctacgacggctatcacgcggtattcaaccagcgcctgccc gaatttctcgagcgggcgcgcaaacaggacgcgtgggtgatgggcgaggccgatgcatcg gcgcggtggcggcagatggccaacggcaacgcactgcgcaaggacaggctcgccgacgat atccgtcgccagtacctgaccgactatgccaactactggagccagtttctcgacgacgtg aggccggtgtccggcagcgacggcacgctggcgcccgatctgcagacgctgcgcacactg gccgcgccggattcgccattggcgagactcgcgcgaacggccgcgcgcgagacgtcgctg tcagtcgctgacggcgcggacgagccgtcggccgcggggagtgccatcaacgtgatcacc cgtcgctcgcaggtagcgcgcgccgcgagcgccgtggcggcaaccgctaccatcggtcag cttgcgcagcggaagatggaacgtgaactggtcgacagacgctttgccgcgctgcgcgaa gtcgtgaccggccaggccgatagcggcagcgcgctgcctggcggcagcggcgtgctgcag ctgggcggcgtcatcgggctgatcaacgagcagtacacgcgattgatgacggccggcgac gtgctcgccaccaacagcatgccgcccacggacgacctcggctccacgatgcagttcgag gcgcagaagcttccgccgccgtttcgggccgtgctcgtgggcctcgcgtcgcagtcgata cgcaaggtggaccgcaacgtcggctcgctgctgacgatgcaggtcgaatcgagcgttggc gcgcaatgccgccgcgctgtcgaaggcaaatatccgttcgtcgcgagcgtccaggaagtc gacatcgacgatttcaaccgcgtgttcgcggcaggcggcctgctcgacgacttcttccac aagacgctcgcgagccgtgtcgatacgagcatacggccgtggcgctataagccggtcagc cccggcatgccgcccatgcagggaccgagcctcgatccgttcgagcgcgccgcggcgatc cgccagacatttttccgcgatccgagcgcaacccggatgtcgtggaacgcgggcctgaag gtcgtgtcgttggacccagagattaccgatctgctcatcgacgtcgacgggcaaaacctg cgctatgcgcacgggccggtcgcgacattcccgatcacatggccggggccgcgcggtggc tcgatggccggcctcaccgcgaatccgcgcgtgcgtccggacacgtcgaccgtgatgacc gcaggtccgtgggcgctgttccgtctgatcgaccgggggcttgtgacgtcgacgttgtcg tcgagccgctcggcagtggacttcaatttcgacgaccggcacgcggtgatcgaactgacg tcgggcggacagtcgggaccgcaactgacggcgttgctgcggggttttcgttgtcctggc agtggaagcgcgctggcaaggcgagcggaagcgtcgtcaggctccgcatccgccgacgag ctgtag

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