Paraburkholderia atlantica CCGE1002: BC1002_6358
Help
Entry
BC1002_6358 CDS
T01217
Name
(GenBank) glycoside hydrolase family protein
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
bge
Paraburkholderia atlantica CCGE1002
Pathway
bge00040
Pentose and glucuronate interconversions
bge01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
BC1002_6358
Enzymes [BR:
bge01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
BC1002_6358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-ProteinID:
ADG20215
UniProt:
D5WLW9
LinkDB
All DBs
Position
3:834970..837612
Genome browser
AA seq
880 aa
AA seq
DB search
MKMRSVRELAVLGLFVLTVAGCGEGSNITGTSSATPPTNPTSPTTPVWMPGRYAGDTNLP
DSPSLPADTQICSTLQASNNLVKNADGSLPLSADPTPATYGGATIALNNPDQARIQAALD
ACGAAVDAEVGAKITQADQQAAATQQAANNPNVNIAGASSETLSNPTYKATRFAVRLVKN
SSGAGNAFLSGPLVLPSGVTLWVDDGVTLFASRDVVVYDKTAQDRPNSITCGAAINNPAG
LPAPAGTANAGTPTIAGTSGMQNCYPLIRGTHTVNASIMGTGSIDARGYMPLISSSPQYP
MIRWATGVTEAFTYSGNNITGVTTPKFSCTNTIAAYRAGTLAPEGTACDVVTAMGKTTLT
TPAVTYVVNRQATSIPNGYTVNGGGCTAGTAGCARWVPASWWDISYHGNKDIGGGPYSFQ
GNPGMLWMQQSKNLSLYQITLRNSTFFTVEADGVDGFTVWGIKIITPLLPDAANQASVGM
NNDAFDGVSGSYTHLYTGATIDASSTGVKNTDGVDPSVAAGPDHAALGTGSKTTSAGQVY
FDGYVKNVAIVYNFLSPSDDNVAFKGGLQDPRPASARGATTPANMLWAIDGNRDVSSNRT
YGITVAHNHNYNGHGLSIGSPTNAGVRNIHFYDNYFDNIYDGSNSSTDNGIVGLRIKSGQ
ARGGDVSNIYYDGACMRGVKDFLVFDMYYTGPSADPITYTGLGWLVPSFHDINLSNIRMM
NIPANKAAGKTGGGGLTFRGLHADTAYANTQSVIQLNLDNVVADKDVALSIANLSKPVVN
IGSTDGSSQSKAANATLNLGANVSLIGSSMAHGSGGILTNTSSGAGKYTTPTNTLNLTVN
GSDDAGAAGDTDPAGTIVSQNAKLSLCDQASSWPVFPNVK
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgcgctcagtccgagagcttgcggtactcggcctgtttgttttgaccgtcgcc
ggttgcggtgaaggcagcaacatcacaggcacgagttcggcgacgccgccgaccaacccg
acttcgccgacaaccccggtctggatgcctggccgctatgccggcgacaccaacctgccg
gattcgccgtcgttgccggcggacacccagatttgctcgacgcttcaggcgagcaacaat
ctggtgaagaacgcggacggctcgctgccgctcagcgcggacccgacgccggccacctac
ggcggcgccaccatcgcgttgaacaatcccgaccaggcgcgtatccaggccgcgctcgac
gcgtgcggcgccgccgtggacgcggaagtgggcgcgaaaatcacgcaggctgatcagcag
gccgccgctacgcaacaggcggccaataatccgaacgtcaacatcgcgggtgcatcgagc
gaaacgctgtcgaacccgacctataaggccaccaggttcgcggtgcgtctcgtcaagaac
agcagcggcgccggcaatgcgttcctcagcggtccgctggttctgccttcgggcgtcacg
ctgtgggtcgacgacggcgtcacgctgttcgcgagccgcgacgtggtcgtgtacgacaag
accgcacaggatcggccgaactcgatcacctgcggcgccgcgatcaacaacccggccggg
cttcccgcgccggctggcaccgccaacgcgggcacgccgaccatcgcgggcacgagcggc
atgcagaactgctatccgctgattcgcggcacgcatacggtcaacgcgtcgatcatgggc
accggttcgatcgatgcacgtggctatatgccgctgatcagctcgtcgccgcaatatccg
atgatccgttgggcaaccggcgtgaccgaggcgttcacgtattcgggcaacaacatcacc
ggcgtgacgacgccgaagttcagctgcaccaacacgatcgccgcttaccgcgcgggcacg
ctcgcgccggaaggcaccgcttgcgacgtggtcaccgcgatgggcaagacgacgctgacc
acacctgccgtcacctatgtggtgaaccgccaggcaaccagcatcccgaacggctacacg
gtcaacggcggcggctgtaccgccggcacggccggttgcgcacgctgggtgccggcaagc
tggtgggatatctcgtaccacggcaacaaggacatcggcggcggcccgtacagcttccag
ggcaaccccggcatgctgtggatgcagcagtcgaagaacctgtcgctgtatcagatcacg
ttacgcaacagcaccttctttaccgtcgaagccgacggcgtggacggcttcaccgtgtgg
ggcatcaagatcatcacgccgttgctgcccgatgcggcgaaccaggcgagcgtcggcatg
aacaacgatgccttcgacggcgtcagcggctcatacacgcacctctatacgggcgcgacg
atcgacgccagctcgaccggcgtgaagaacaccgacggtgtcgacccgagcgttgccgca
ggtccggaccacgcggctctcggcacgggcagcaagacgacgtccgcaggccaggtgtac
ttcgacggctacgtgaagaacgttgcgatcgtgtacaacttcctgagtccgtcggacgac
aacgtcgcattcaagggcggactgcaggacccgcgtccggcgtcggcacggggcgcgacg
acgccggccaacatgctgtgggccatcgacggcaaccgcgacgtttcgtcgaaccgcacg
tacggcatcacggtggcgcacaaccacaactacaacggtcatggtctatcgatcggcagc
ccgacgaatgcaggtgtccgcaacattcacttctacgacaactacttcgacaatatctac
gacggcagcaactcgtctaccgataatggcatcgtgggtctgcgcatcaagagcggtcag
gcacgcggcggcgacgtcagcaacatctactacgacggcgcatgtatgcgtggtgtgaag
gatttcctcgtgttcgacatgtactacacgggcccgagtgccgatccgatcacgtacacg
gggttgggctggctggtgccgagcttccacgacatcaacctgagcaacatccgcatgatg
aacatcccggccaacaaggctgcgggcaagaccggcggcggcggtctgacgttccgtggt
ctgcatgccgacacggcttacgccaatacgcagagcgtgatccagttgaacctggataac
gttgtcgcggacaaggacgtcgcgttgtcgattgcgaatctgagcaagcctgtcgtgaac
atcggttcgaccgatggctcgtcgcaatcgaaggcggccaacgccacgctgaacctcggc
gcgaacgtgagtctgattggctcgtcgatggctcacggctcgggcggcattctgacgaac
acgtcgagcggcgcgggcaagtacacgaccccgacgaacacgttgaacctgaccgtcaat
ggcagcgacgacgctggcgccgcgggcgacacggacccggcgggcaccatcgtttcgcag
aatgcgaaactgtcgctgtgcgatcaggcttcgtcctggccggttttcccgaatgtgaag
taa
DBGET
integrated database retrieval system
