Paraburkholderia atlantica CCGE1002: BC1002_6667
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Entry
BC1002_6667 CDS
T01217
Name
(GenBank) GAF modulated sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
bge
Paraburkholderia atlantica CCGE1002
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bge03000
]
BC1002_6667
Transcription factors [BR:
bge03000
]
Prokaryotic type
Helix-turn-helix
Other families
BC1002_6667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
GAF
HTH_23
Mg_chelatase
AAA_2
HTH_30
PAS_4
AAA_5
HTH_20
HTH_28
Xre-like-HTH
HTH_29
HTH_22
HTH_17
HVO_A0261_N
AAA
Motif
Other DBs
NCBI-ProteinID:
ADG20506
UniProt:
D5WMR0
LinkDB
All DBs
Position
3:complement(1152580..1154520)
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AA seq
646 aa
AA seq
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MPYVSQTQHVDRVRGAIEGRLPAPANSPRLVSSWQRSFEQYRLDPSSVIGPRVLSSAELR
EVQGKEEAFLRASGQCLTRLHEMIRVADYCVMLSDAHGVTIDYRIDRDRRNDFKHAGLHI
GSCWSEREEGTCGIANVLTDLAPITVHKTDHFRAAFTTLTCSASPIFAPTGELIGVLDAS
AIRSPDNRDSQGLVFQLVRQSASLIEDGYFLNQTAQHWVLFGHQSRHFVEAQPEALIAFD
ECGNIAAANRKAHESIAGLDGPRHIDEIFDTSEVRLHDVARTDMIVALRLRATGAMLYAR
IRAPMRRAARPLATTRPGDVHADSSIGAMSRFLHSSDERIARNAEVALRIAGKRLPVLLL
GETGVGKEVFAHAVHDSGSRRTRPFVAVNCGAIPEPLIESELFGYAPGAFTGARSRGARG
KIALAHGGTLFLDEIGDMPLGLQTRLLRVLAEGEVVPLGGDAPVRVDIDVICATHRDLVQ
MVEAGTFREDLYYRLSGATLRMPPLRERTDIRDVIDTVFNEEAQAASHVLMLDPQFAERL
AAFSWPGNIRQLRNVLRYACAVCDSARVELRHVSPDFAAQLAPAATPALAADFTSPASAD
DERARIVAALTRCQWRPNAAAQVLGISRATLYRRIARLGIVGPHRT
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgccctatgtttctcaaacgcagcacgtcgatcgcgtacgcggggccatcgaagggcgc
ttgcccgcgcctgcgaattcgccgcgcctcgtgtcgtcgtggcagcgctcattcgagcag
taccggctcgaccccagttccgtgatcggcccgcgcgtgctgtcgtccgccgagctgcgc
gaagtccaaggcaaggaggaagcctttctgcgtgcgtcgggccagtgcctgacgcggctg
cacgagatgatccgcgtcgccgactattgcgtgatgctgtccgacgcgcacggcgtcacg
atcgactatcggatcgaccgcgaccggcgcaacgatttcaagcatgcggggctgcacatc
ggctcgtgctggtccgagcgcgaagaaggcacctgtggcatcgcgaacgtgctcaccgat
ctcgcgccgatcaccgtgcacaagaccgatcacttccgggccgcattcacgacgctcacg
tgcagtgcctcgccgatcttcgcgccgaccggcgagctgatcggcgtgctcgatgcatcg
gcgattcgatcgcccgacaaccgcgacagccaggggctggtttttcaactggtgcggcaa
agcgcgagtctgatcgaggatggctatttcctgaaccagaccgcacagcactgggtcctg
ttcggccatcaaagccgccatttcgtcgaagcgcaacccgaagcactgatcgcattcgac
gaatgcggcaacatcgccgccgcaaaccgcaaggcgcacgagagcatcgcgggcctcgac
ggtccgcgtcacatcgacgagatattcgatacgtccgaggtccgtctgcacgacgtcgcg
cgcaccgacatgatcgtggcgctgcggctgcgcgcgaccggcgcgatgctgtatgcgcgc
attcgcgcgccgatgagacgcgcggctcgcccgctcgccacgacacggccgggcgatgtg
cacgccgatagcagcatcggcgcaatgagccgctttctgcacagctcggacgaacggatc
gcgcgcaatgcggaagtcgcgttgcggatcgccggcaagcggctgccggttttgctgctt
ggcgaaaccggagtcggcaaggaagtgttcgcgcacgcggtgcacgactcgggttcgcgg
cgtacgcggccgttcgtcgccgtgaattgcggtgcgattccggagccgctgatcgagagc
gaactgttcggttatgcgcccggcgcgttcaccggcgcgcgcagtcgcggcgcacgcggc
aagatcgcgctcgcgcacggcggcacgctgtttctcgatgaaatcggcgacatgccgctc
ggcctgcaaacacggctgctgcgcgtgctcgccgagggcgaagtggtgccgctcggcggc
gacgcgccggtgcgcgtcgatatcgacgtgatctgcgcgacgcaccgcgatctggtgcag
atggtcgaagcgggaacgttccgcgaagatctctactatcgactcagcggcgcgacgctg
cggatgccgccgctgcgcgagcgcaccgacatccgcgatgtgatcgatacggtgttcaac
gaggaagcacaggcggccagccatgtgctgatgctcgatccgcaattcgccgagcgtctt
gccgctttctcgtggcccggcaatatccggcagctgcgcaacgtgctgcgctatgcgtgc
gcggtctgcgattcggctcgcgtcgagttgcggcacgtgtcgccggacttcgccgcgcaa
ctcgcacccgccgcgacgcccgctctcgcggcggacttcacgtcgccggccagcgccgac
gacgagcgggccaggatcgttgcggcactcacgcgttgccagtggcggcccaatgccgcc
gcgcaggtgttgggcatatcgcgcgcgacgctgtaccggcgcatcgcgcggctgggcatc
gtcgggccgcatcgcacatag
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