Paraburkholderia atlantica CCGE1002: BC1002_6880
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Entry
BC1002_6880 CDS
T01217
Name
(GenBank) nodulation ABC transporter NodI
KO
K09695
lipooligosaccharide transport system ATP-binding protein
Organism
bge
Paraburkholderia atlantica CCGE1002
Pathway
bge02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BC1002_6880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bge02000
]
BC1002_6880
Transporters [BR:
bge02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipooligosaccharide transporter
BC1002_6880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_22
AAA_15
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ADG20686
UniProt:
D5WN07
LinkDB
All DBs
Position
pBC201:complement(114733..115647)
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AA seq
304 aa
AA seq
DB search
MPTAAITFTDVSKSYGGKLAVNGLSFHVEPGECFGLLGPNGAGKSTTARMVLGMALPDAG
TITVLGEPVPGRARRARARIGVVPQFDNLEPGFTVRENLEIFGSYFGMSAGEISVVIPSL
LEFARLESKADARVIELSGGMKRRLTLARALINDPQLLVMDEPATGLDPHARHLIWERLR
LLLARGKTILLTTHFMEEAERLCNRLCVIDEGRSIAEGTPNALIEEQIGSQVIEIYGGNS
HELRPLLEPYTQRTEVSGEALFCYAADPEQVRLQLRAHAGLRILQRPANLEDVFLRLTGR
EMKD
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgccaactgcagcaatcacgttcacagatgtcagcaagtcctacggcgggaagctcgct
gtcaatggactgtcgttccacgtagagccgggcgagtgtttcggccttttggggcccaac
ggcgcaggcaagagcacgaccgcgcggatggtcctcgggatggcgctacctgacgcgggt
acgatcacagtcctcggagagccagtgcccggacgcgcgcgacgggcacgtgcacgaatt
ggcgtggttccgcaattcgataatcttgaacccgggttcacagtgcgcgagaacctagag
atattcgggagctactttggcatgagcgcaggtgagatttcggttgtgattccttctttg
ctcgaattcgcgcgtctggaaagcaaggctgatgcgcgcgttatcgaattatcaggaggc
atgaaacggcgtctgacgctcgctcgcgcgctcatcaacgacccccaactacttgtaatg
gacgagcccgcgacgggccttgatccgcatgcgcgccacctcatctgggaacgcctgcgc
ttgctgctcgcgcgcggcaaaacaattcttctcaccactcatttcatggaagaagcggag
cgactgtgcaaccgtctctgtgtgattgacgaagggcgcagcattgccgaaggtactcct
aatgcgctgatcgaagagcagattgggagccaagtgattgagatatatggcggcaattca
catgaactgcgcccgttactcgagccctacacacagcgaaccgaagtgagcggcgaagca
ttgttttgctacgccgctgatcctgagcaggtgcgtttgcagttgcgggcgcatgcgggt
ctgcgcattctccaacgccccgccaacctggaagacgtgtttttgcggctaaccggccgc
gaaatgaaggattag
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integrated database retrieval system
