Paraburkholderia atlantica CCGE1002: BC1002_6887
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Entry
BC1002_6887 CDS
T01217
Name
(GenBank) transcriptional regulator, NifA subfamily, Fis Family
KO
K02584
Nif-specific regulatory protein
Organism
bge
Paraburkholderia atlantica CCGE1002
Pathway
bge02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BC1002_6887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bge03000
]
BC1002_6887
Transcription factors [BR:
bge03000
]
Prokaryotic type
Helix-turn-helix
Other families
BC1002_6887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
GAF_2
AAA_5
Mg_chelatase
AAA
AAA_2
AAA_16
GAF_3
AAA_3
bpMoxR
Parvo_NS1
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ADG20693
UniProt:
D5WN14
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All DBs
Position
pBC201:124263..125909
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AA seq
548 aa
AA seq
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MSHSLINESPPDFDVVTEVLKTLDSSRNAEHALKRSLWFLSRARGWRSAFIAVEQPDGKL
GGLCSTGLSDGWREGMRFPSGEGIVGRIQESESAVVVPELDGDPMFDDRTGAVRVSNAER
VALLGAPIRHEGRPLGVLVALCENPDGKRVFADDLQLLEVVASPIARALLLDREADPSRK
SVQEEISRRRNAAAPIYQVDWAIGRSASMQHVFAQVHQVAPARTTVLLRGESGTGKELIA
RAIYRLSPRKDQPFVSVNCAALTETLLESELFGHEKGAFTGAQTQRKGRFELAHGGTLFL
DEIGDISPSFQAKLLRVLQEREFERVGGTTPVRVDVRLIVATNRNLEQMVREGEFRADLY
YRINVVSIVLPPLRERREDIPEMAQYFLNRFNRENGRALHFNEEALRVLSSCYWPGNVRE
LENCIERTATMAHHDTIGRSSFLCEIDQCLTKVLHHLEREDAVRPARPSDVTVSNALNVP
AKFGAPERDAGGLGMHSGEHIPEDERERLLWAMERCGWVQAKAARLLGITARQIGYALRK
HGIKLRRF
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcattctcttatcaacgagagccctcccgatttcgatgtagtgacagaagtgcta
aaaacgctggactcatcccgaaatgcggagcacgcgttgaagaggtcgctgtggtttctg
tcgcgtgcgagaggctggcggtccgcgttcatcgccgtcgagcagccggatggaaagctt
ggcggcctgtgtagcacaggactgtcagacggctggcgagaaggtatgcgttttccctcc
ggtgaagggatcgtagggcggatacaggaaagcgagtccgccgtggttgtgcctgagttg
gatggtgacccaatgttcgacgaccgcacgggggctgttcgtgtttccaatgccgagcgt
gtcgctctacttggggcaccgatccggcacgaaggacggccgctgggggtgctcgtagcc
ctttgtgagaatccggatgggaagcgtgttttcgcagacgatctccaacttttggaagtt
gttgcttcgccaatagccagggcacttttgcttgaccgtgaggctgatccgagccgaaaa
agcgtgcaggaggagattagtcgccgacggaacgcggccgctcctatatatcaagtcgat
tgggcaatcggccgatctgcgtcgatgcagcacgtattcgcgcaggtccatcaggtcgca
cctgcgagaacgacggtgctcttgcgcggcgagagcggcaccggcaaggagttgatcgcg
cgtgcaatctatcgtttgtccccgcgcaaggaccagccattcgtctcggtgaactgtgcc
gcgctcacggaaacactgctggaaagcgagctgtttggccacgagaagggggcgttcacg
ggcgcgcaaactcagcgaaaggggcgcttcgaattggcgcacggcggaacacttttcctc
gacgagataggtgatatatcgccgtcgttccaagcgaaactactgcgcgttctgcaggag
cgggagttcgagcgggtaggggggacaacgcccgtgagagttgacgtgaggctcatcgtt
gcaactaatcgcaatctggaacaaatggtgagagagggcgaattccgagcggatctttac
taccgcatcaacgtggtgagcatcgtgttgccgccgctgcgcgagcgacgggaagacatc
cccgagatggcgcaatacttccttaaccgctttaatcgtgagaacggtcgcgctctgcat
ttcaacgaggaagcgttgcgcgtgctgtcgagttgttactggcccggaaacgtgcgcgag
ctcgaaaactgcattgagcggactgcgacaatggcgcatcatgacacgattggtcgttct
tcgtttctctgcgagatcgaccagtgcctcacgaaggtgttgcatcatctggagcgagaa
gacgcagtacgtccggcacgcccgtcggacgttacagtcagtaacgcgctgaacgttccc
gcgaaattcggcgccccggagcgcgacgccggcggtctcggcatgcactctggtgagcac
atccctgaggacgagcgtgagcggctgctctgggccatggagcgctgcggttgggtgcag
gcaaaggcggcacgcctgctcggcattacggcgcggcagatcggctatgcactgcgcaag
cacggaatcaaactacgccgcttctag
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