Bradyrhizobium genosp. A: ACP2YP_00230
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Entry
ACP2YP_00230 CDS
T11253
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bgea Bradyrhizobium genosp. A
Pathway
bgea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACP2YP_00230 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgea03019
]
ACP2YP_00230 (pnp)
03016 Transfer RNA biogenesis [BR:
bgea03016
]
ACP2YP_00230 (pnp)
Enzymes [BR:
bgea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACP2YP_00230 (pnp)
Messenger RNA biogenesis [BR:
bgea03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACP2YP_00230 (pnp)
Transfer RNA biogenesis [BR:
bgea03016
]
Prokaryotic type
tRNA degradation factors
ACP2YP_00230 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
DUF5813
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
XRZ36013
LinkDB
All DBs
Position
52814..54970
Genome browser
AA seq
718 aa
AA seq
DB search
MFNKHSVEIDWGGRPLKLETGKIARQADGAVIATYGETVVLATVVAAKAPREGVDFLPLT
VDYQEKTYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVDGWRNETQVIATVLSH
DMENDPDIVALVASSAALTLSGAPFKGPIGAARVGFANDEFILNPTLDEMVDTQLDLVVA
GTADAVLMVESEAKELNEDIMLGAVMFGHRHFQPVINAIIELAEKAAKEPREVTVIDNSA
LEKEMLGLVEQELRAAYAIPVKQDRYAAVGKVKEKVIAHYFPEGQEPKYDKLRIGGVFKE
LEAKIVRWNILDTGKRIDGRDSKTVRNIVAEVGVLPRAHGSALFTRGETQAIVVTTLGTG
EDEQYIDALSGTYKETFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHH
EFPYTTRVVSEITESNGSSSMASVCGASLALMDAGVPLKRPTAGIAMGLILEDKRFAVLS
DILGDEDHLGDMDFKVAGTEAGITSLQMDIKIEGITEEIMKVALAQAKDGRIHILGEMAK
ALTNARAELGEYAPRIETFKIATDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS
SDGEAMKAAIKWIKSIASDPEVGQIYDGTVVKVMEFGAFVNFFGSKDGLVHISQLASARV
QKTSDVVKEGDKVKVKLLGFDDRGKTRLSMKVVDQTTGEDLEGKGGEGEKAPREAAGE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataagcattcagtcgagatcgactggggcggacgccctctcaagctcgaaacc
ggcaagatcgcacgccaggccgacggcgccgtcatcgccacctatggcgagaccgtggtg
ctcgccaccgtcgtcgcggcgaaggcgccgcgtgaaggcgtcgacttcctgccgctgacc
gtcgactaccaggaaaagacctatgcagccggccgcattcctggcggctatttcaagcgc
gagggccgtccgaccgagaaggagacgctggtctcccgcctgatcgaccgtccgatccgt
ccgctgttcgtcgacggctggcgcaacgagacccaggtgatcgccaccgtgctgtcgcac
gacatggagaacgatcccgacatcgtcgcgctggtggcctcctcggccgcgctgaccctg
tccggcgcgcccttcaagggcccgatcggtgctgcccgcgtcggcttcgccaatgacgag
ttcatcctcaacccaacgcttgacgagatggtcgacacccagctcgacctcgtcgtcgcc
ggcaccgccgacgccgtgctgatggtagaatcggaagccaaggaactgaacgaagacatc
atgctcggcgccgtgatgttcggtcaccgccacttccagccggtcatcaacgcgatcatt
gagctcgccgagaaggccgccaaggagccgcgcgaagtcaccgtcatcgacaattccgcg
cttgagaaggaaatgctcggcctggtcgagcaggagctgcgcgccgcctacgccattccg
gtcaagcaggatcgctacgccgcggtcggcaaggtcaaggaaaaggtgattgcccactac
ttccccgaagggcaggagccgaaatacgacaagctgcgcatcggcggcgtgttcaaggag
ctcgaggccaagatcgttcgctggaacatcctcgacaccggcaagcgcatcgacggccgt
gactcgaagaccgttcgcaacatcgtcgccgaagtcggcgtgctgccacgcgctcacggt
tcggcgctgttcacccgcggcgagacccaggcgatcgtcgtgaccacgctcggcaccggc
gaggacgagcagtatatcgacgcgctgtcgggaacgtacaaagagacgttcctgctgcac
tacaacttccctccctactcggtcggtgagaccggtcgcctcggcggcaccaagcgccgc
gagatcggccacggcaagcttgcctggcgcgcgatccacccggtgctgccgccgcatcac
gagttcccctacaccacgcgcgtggtgtcggagatcaccgaatcgaacggttcgtcctcg
atggcttcggtctgcggtgcttcactcgcgctgatggatgccggcgtgccgttgaagcgg
ccgaccgcgggcatcgcgatgggcctgatcctcgaagacaagcgcttcgcggttctctcg
gacatcctcggtgacgaagaccatctcggcgacatggacttcaaggtcgccggtacggaa
gcgggcatcacctcgctccagatggacatcaagatcgagggcatcaccgaagaaatcatg
aaggtggcgctggcccaggccaaggatggtcgtatccacatcctcggcgaaatggccaag
gcgctcaccaacgcccgcgccgagctcggcgaatacgcgccgcgcatcgagaccttcaag
atcgccaccgacaagatccgcgaagtgatcggcaccggcggcaaggtgatccgcgagatc
gtcgagaagaccggcgccaaggtcaacatcgaggacgacggcaccgtgaaggtcgcctcc
tcggacggcgaggcgatgaaggccgcgatcaagtggatcaagtcgatcgcttccgatccg
gaagtcggccagatctatgacggtaccgtcgtcaaggtgatggagttcggcgccttcgtg
aacttcttcggctccaaggacggtctcgtccacatcagccagctcgcttcggcgcgcgtg
cagaagacctccgacgtcgtcaaggaaggcgacaaggtcaaggtcaagctgctcggcttc
gacgatcgcggcaagacccgcctctcgatgaaggttgtcgaccagaccaccggcgaagac
ctcgaaggcaagggcggcgagggcgagaaggctccgcgcgaagcggccggcgagtaa
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