Bradyrhizobium genosp. A: ACP2YP_02160
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Entry
ACP2YP_02160 CDS
T11253
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bgea Bradyrhizobium genosp. A
Pathway
bgea00300
Lysine biosynthesis
bgea00470
D-Amino acid metabolism
bgea01100
Metabolic pathways
bgea01110
Biosynthesis of secondary metabolites
bgea01120
Microbial metabolism in diverse environments
bgea01230
Biosynthesis of amino acids
Module
bgea_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bgea00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ACP2YP_02160 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ACP2YP_02160 (dapF)
Enzymes [BR:
bgea01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ACP2YP_02160 (dapF)
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Paralog
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
DUF2924
Response_reg
Motif
Other DBs
NCBI-ProteinID:
XRZ36378
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All DBs
Position
466650..467525
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AA seq
291 aa
AA seq
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MSALANHAFAKMNGIGNEIVVVDMRDSAGRITSADARAVASAHGGVPYDQLMVLQKPRLD
GTEAFISIYNNDGSEAGACGNGMRCVVRRIFEKSGQTTATFETAAGLLNAWQGPAPDLYT
VDMGAPKFGWQDIPLAEEFRDTRYIELQIGPIDKPILHSPSVVSMGNPHAIFWVDDVNAY
DLERFGPLLENHPIFPDRANITLADIADREHITMRTWERGAGLTRACGSAACATAVAAAR
LKRTERKVEMTLPGGKLGIEWRERDDHVLMTGTATFEYEGHFDPALFAPVG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgctggccaaccacgcatttgccaagatgaacggcatcggcaacgagatcgtc
gttgtcgacatgcgcgattccgccggccggatcacgtcggccgacgcccgtgcggtggcc
tccgcgcacggcggcgtgccctatgaccagctcatggtgctgcagaagccgcggctcgac
ggcaccgaagccttcatcagcatctacaacaatgacggctcggaagccggcgcctgcggc
aacggcatgcggtgcgtggttcgccgcatcttcgagaagagcggccagaccacggcgacg
ttcgagaccgcggccggcctgctcaatgcctggcagggcccagcgcccgatctctacacc
gtcgacatgggcgcgccgaagttcggatggcaggacattccgctggcggaggagtttcgc
gacacccgctacatcgaactgcagatcgggccgatcgacaagccgatcctgcattcgccc
tcggtggtcagcatgggcaatccgcacgcgatcttctgggtcgacgacgtcaatgcctat
gatctcgagcgttttggtccgctgctggaaaatcacccgatcttccccgaccgcgccaac
atcacgctcgccgatattgccgatcgtgagcacatcaccatgcgcacctgggagcgcggc
gcgggtctcaccagggcctgcggctctgcggcttgtgcgaccgcggttgcggctgcgcgc
ctgaagcgcaccgagcgcaaggtcgagatgacgctgcccggcggcaagctcggcatcgaa
tggcgcgagcgcgacgaccacgtgctgatgacgggcacggcgaccttcgaatatgaaggc
catttcgatccggcgctgttcgcgccggtcggctga
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