KEGG   Bradyrhizobium genosp. A: ACP2YP_19895
Entry
ACP2YP_19895      CDS       T11253                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
bgea  Bradyrhizobium genosp. A
Pathway
bgea02024  Quorum sensing
bgea03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bgea00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACP2YP_19895 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    ACP2YP_19895 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bgea03019]
    ACP2YP_19895 (hfq)
   03036 Chromosome and associated proteins [BR:bgea03036]
    ACP2YP_19895 (hfq)
Messenger RNA biogenesis [BR:bgea03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     ACP2YP_19895 (hfq)
Chromosome and associated proteins [BR:bgea03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    ACP2YP_19895 (hfq)
SSDB
Motif
Pfam: Hfq Hfq_1
Other DBs
NCBI-ProteinID: XRZ32454
LinkDB
Position
4292009..4292257
AA seq 82 aa
MAADRAQNLQDTFLNHVRKTKTPLTIFLVNGVKLQGIVTWFDNFCLLLRRDGHSQLVYKH
AISTIMPGAPIQLFEGGEDQPA
NT seq 249 nt   +upstreamnt  +downstreamnt
atggcggcagaccgcgcacaaaacctacaggacaccttcctcaatcacgttcgcaaaacc
aaaacgccactgacgatctttctggttaacggagtgaagctccagggcatcgtgacctgg
ttcgacaatttctgcttgctgcttcggcgcgacggtcattcgcagctcgtctacaagcat
gcgatctcgaccatcatgccgggcgctccgatccagctattcgaaggcggcgaggatcag
ccggcttga

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