Bradyrhizobium genosp. A: ACP2YP_21700
Help
Entry
ACP2YP_21700 CDS
T11253
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bgea Bradyrhizobium genosp. A
Pathway
bgea03030
DNA replication
bgea03430
Mismatch repair
bgea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bgea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACP2YP_21700 (dnaE)
03430 Mismatch repair
ACP2YP_21700 (dnaE)
03440 Homologous recombination
ACP2YP_21700 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgea03032
]
ACP2YP_21700 (dnaE)
03400 DNA repair and recombination proteins [BR:
bgea03400
]
ACP2YP_21700 (dnaE)
Enzymes [BR:
bgea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACP2YP_21700 (dnaE)
DNA replication proteins [BR:
bgea03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACP2YP_21700 (dnaE)
DNA repair and recombination proteins [BR:
bgea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACP2YP_21700 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HROB
DUF6374
Motif
Other DBs
NCBI-ProteinID:
XRZ32793
LinkDB
All DBs
Position
complement(4673582..4677085)
Genome browser
AA seq
1167 aa
AA seq
DB search
MPSAGFVHLHVHSAYSLLKGSIKIAKLAELAKKDHQPALALTDTDNLFGALEFSDKMASS
GIQPIVGCELAIDFGDQDPNARNALPPSRVVLLAAQERGYRSLMRLNSRAFLESPDSHAP
FIKFDWFDGETEGLIALTGGPDGPISLALAAGHAEIAATRCERLAGLFGDRLYVELQRHN
IDKERRIESGLIDIAYAKGLPLVATNEPYFATTDDYEAHDALLCIAGGRLIAETEREQLT
PDHRFKTRAEMAVLFADIPEALASTIEIAERCSFRPMTRKPILPFFTVGAAGSSDAAAVE
AAELKRQAEEGLANRLRVHGLSQGTTEEDYSKRLAFELDVILRMKYAGYFLIVSDFIKWA
KSQGIPVGPGRGSGAGSLVAWALTITDLDPIKFGLLFERFLNPERVSMPDFDIDFCQDRR
GEVIKYVQERYGRDQVAQIITFGTLQARGVLRDVGRVLQMPYGQVDKLTKLVPQNPAAPV
TLAAAIESEPKLQAFRDEDPVVARAFDIAQRLEGLTRHASTHAAGIVIGDRPLSELVPMY
RDPKSDMPVTQFNMKWVEPAGLVKFDFLGLKTLTVLDVAVKLLKPRDIHVDLATLPIDDA
ESYQMLARGEVVGVFQVESQGMRRALVDMRPDRFEDIIALVALYRPGPMANIPTYCSRKH
GDEEPEYLHPVLEPILKETFGVIIYQEQVMQIAQVMSGYSLGDADLLRRAMGKKIRAEMD
KQRDIFVAGAVKNGVPKGQAETIFELLAKFADYGFNKSHAAAYALVSYHTAYMKAHYPVE
FIAASMTLDLNNTDKLSEFRSEAQRLGIKVEPPNINRSGATFEVGDKVIYYALAALKGVG
IQAIDQIIEERTKRGLFTSLADFAARVNPRAINKRVIESLAAAGAFDTLEPNRARVFAGA
DSILAACQRAHQAETIGQNDMFGMSADAPTIMLPQIEPWLPAERLRREYDAIGFFLSGHP
LDDYATVLKRLRVQSWAEFSRAVKTGATAGKVAATVVSRMERRTKTGNKMGIMGLSDPTG
HFEAVLFSEGLAQYRDVLEPGAAVLLQLGAELQGEDVRARVLHAEPLDDAAAKTQKGLRI
FVRDTKPLDSIAKRLAGPEAAGANGAAPKIGSPGIAPRSNGDGEVSLVMMLDLETEVEMK
LPGRFKVSPQIAGAIKAVAGVVDVQQI
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcgccggatttgtccaccttcacgttcactcggcctattcgctgctcaagggc
tcgatcaagatcgccaagctcgccgagctggcgaagaaggaccaccagccggcgctggcg
ctgaccgacaccgacaatctgttcggtgcgctggaattctcagacaagatggcgagttcc
ggcatccagccgatcgtcggctgcgagctcgcgatcgatttcggcgatcaggatcccaat
gcgcgcaacgcgcttccgccttcgcgcgtggtgctgctggcagcccaggagcgcggctat
cgcagcctgatgcggctgaattcccgcgcgttcctcgaatcgcccgacagccacgcgccg
ttcatcaagttcgactggttcgacggcgagaccgagggcctgatcgcgctgaccggcggc
ccggacgggccgatctcgctcgcgctggccgcggggcacgccgaaatcgcggccacgcgc
tgcgaacgtctcgccggcctgttcggcgaccgcctctatgtcgaattgcagcgccacaac
atcgacaaggaacggcgcatcgagagcggactgatcgacattgcctatgccaaaggcctg
ccgctggtcgcgaccaacgagccgtatttcgccacgaccgacgattacgaagcgcatgac
gcgctgctctgcatcgccggcgggcgattgatcgcggagaccgagcgcgagcagctcacg
ccggatcaccgcttcaagacccgcgccgagatggcggtgctgtttgccgacattccggaa
gcgctggcctcgacgatcgagatcgccgagcgctgctcgttccgcccgatgacgcgcaag
ccgattctgccgttcttcacggtcggtgccgccggcagctccgatgcggctgcggtcgag
gcggctgagctgaagcggcaggcggaggaggggctcgccaatcgcctgcgcgtgcacggc
ctgtcgcagggcacgacagaggaagattacagcaagcgcctggcgttcgagctcgacgtc
atcttgcgcatgaaatacgccggctacttcctgatcgtgtccgacttcatcaaatgggcg
aagagccagggcattccggtcgggccgggccgcggctccggcgcaggctcgctggtggcg
tgggcgctgaccatcaccgatctcgacccgatcaagttcggcctgctgttcgagcgcttc
ctcaatcccgagcgcgtctcgatgccggacttcgacatcgacttctgccaggaccgccgt
ggtgaggtgatcaaatacgtgcaggagcgctacggtcgtgaccaggtcgcgcagatcatc
accttcggaacgctgcaggcgcgcggcgtgctgcgcgacgtcggccgggtgctgcaaatg
ccgtacggccaggtcgacaagctcacgaaattggtgccgcagaatccggccgcgccggtg
acgctggcggctgcgatcgagagcgagccgaaacttcaggcgttccgcgacgaagatccg
gtggtggcgcgcgccttcgacatcgcccagcgtctcgagggcctgacgcggcacgcctcg
acccatgcggccggcatcgtgatcggcgatcgccccctgagcgaactcgtgccgatgtac
cgcgatcccaagtcggacatgccggtgacccaattcaatatgaaatgggtcgagccggcc
ggcctcgtcaaattcgacttcctcggcctgaaaacgctgaccgtgctcgatgtcgcggtg
aagctgttgaagccgcgcgacatccatgtcgatctcgcgacgctgccgatcgacgatgcc
gagagctaccagatgctggcgcgcggcgaggtggtcggcgtgttccaggttgaaagccag
ggcatgcggcgcgcgctggtcgacatgcgcccggaccgtttcgaggacatcatcgcgctg
gtcgcgctctatcgcccgggcccgatggcgaacatcccgacctattgctcgcgcaagcac
ggtgacgaggagccggaatatctccatccggtgctcgagccgatcctgaaagaaaccttc
ggcgtcatcatctatcaggaacaggtgatgcagatcgcgcaggtgatgtcgggctattcg
ctcggcgacgccgacctgctgcgccgcgccatgggcaagaagatccgcgccgagatggac
aagcagcgcgacatcttcgtcgcgggcgcggtgaagaacggcgtgccgaaagggcaggcc
gagaccatcttcgagctgctcgccaaattcgccgactacggcttcaacaagagccacgcg
gcggcttatgcgctggtgtcctaccacaccgcctacatgaaggcgcattatccggtggag
ttcatcgcggcgtcgatgacgctcgatctcaacaatacggacaagctctccgaattccgc
tccgaggcgcagcgtctcggcatcaaggtcgagccgccgaacatcaaccgctcaggtgcg
accttcgaggtcggcgacaaggtcatctactacgcgctggccgcgctgaagggcgtcggc
atccaggccatcgatcagatcatcgaggagcggaccaagcggggcctgttcacctcgctc
gccgacttcgccgcgcgcgtcaatccgcgtgcgatcaacaagcgcgtcatcgaaagtctg
gccgctgccggcgccttcgacacgctggagccgaaccgcgcccgcgtcttcgccggtgcg
gactcgatcctggccgcctgccagcgtgcgcatcaggccgagaccatcggtcagaacgac
atgttcggcatgtcagcggacgcgccgaccatcatgctgccgcagatcgagccgtggctg
ccggccgagcggctgcgccgcgaatacgacgctatcggcttcttcctgtcgggccatccg
ctcgacgattacgccaccgtgctgaagcggctgcgggtgcagagctgggcggaattttcg
cgcgcggtgaagaccggtgccaccgccggcaaggtggcggccaccgtggtgtcgcgcatg
gagcggcgcaccaagaccggcaacaagatgggcatcatgggactttccgatcccacgggc
cacttcgaggccgtgctgttttccgaaggccttgcgcaatatcgcgacgtgctggagccg
ggcgccgcggtgctgcttcagttaggtgccgagctccagggcgaggatgtccgcgcccgc
gtgctgcatgccgagccgctggatgacgctgccgccaagacgcagaagggcctgcgcatc
ttcgtgcgggacaccaagccgctggattcgatcgccaagcgcctggccggaccggaagct
gcaggcgcgaacggcgccgcgccaaagatcggcagccccggcatcgcgccgcgctccaac
ggcgacggcgaggtctcgctggtgatgatgctcgatctcgagaccgaggtcgagatgaag
ctgcccggccgcttcaaggtctcgccgcagatcgccggcgcgatcaaggcggtggccggc
gtggtggacgtgcagcagatctag
DBGET
integrated database retrieval system
