Bradyrhizobium genosp. A: ACP2YP_22905
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Entry
ACP2YP_22905 CDS
T11253
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bgea Bradyrhizobium genosp. A
Brite
KEGG Orthology (KO) [BR:
bgea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgea03032
]
ACP2YP_22905 (topA)
03400 DNA repair and recombination proteins [BR:
bgea03400
]
ACP2YP_22905 (topA)
Enzymes [BR:
bgea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ACP2YP_22905 (topA)
DNA replication proteins [BR:
bgea03032
]
Prokaryotic type
DNA Topoisomerases
ACP2YP_22905 (topA)
DNA repair and recombination proteins [BR:
bgea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACP2YP_22905 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
XRZ33014
LinkDB
All DBs
Position
4911054..4913825
Genome browser
AA seq
923 aa
AA seq
DB search
MNIVIVESPAKAKTINKYLGSSYEVLASFGHVRDLPAKNGSVDPDANFKMIWEIDPKAAG
RLNDIAKSLKGADRLILATDPDREGEAISWHVLEVLKEKRALKDQKIERVVFNAITKQAV
TDAMKHPRQIDGALVDAYMARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
ELEIEKFVAREYWSLIATLLTPRGDAFEARLVGADGKKIQRLDIGTGAEAEDFKKALELA
TYAVTAVDAKPARRNPQAPFTTSTLQQEASRKYGFAPAHTMRIAQRLYEGIDIGGETTGL
ITYMRTDGVQIDPSAITQARKVIGEDYGNAYVPDAPRQYQAKAKNAQEAHEAIRPTDMSR
RPDSMSRRLDADQARLYELIWKRTIASQMESAELERTTVDIAAKAGARTLELRATGQVIK
FDGFLALYQEGRDDEEDEDSRRLPAMSPNDALKRQSLAVTQHFTEPPPRFSEASLVKRME
ELGIGRPSTYASILQVLKDRGYVKLEKKRLHGEDKGRVVVAFLESFFSRYVEYDFTANLE
EQLDRISNNEISWQQVLKDFWTGFIGAVDEIKDLRVAQVLDVLDDLLGQHIYPPRTDGGD
IRQCPSCGNGRLNLKAGKFGAFVGCSNYPECRYTRQLAADSETTADRSLGQDPDTGRDVW
VKAGRFGPYIQLGEQKDYEEGEKPKRAGIPKGTSPSDVELELALKLLSLPREIGKHPETG
EPITAGLGRFGPFVKHEKTYASLEAGDEVFDIGLNRAVTLIAEKVAKGPSRRFGADPGKA
IGDHPTLGTVTVKSGRYGAYVTAGGVNATIPAEFEKDTVTLPQAIALIDERAAKGGGKAK
NTKTAKKAAKPAKAKKAAVKAADGDAAPKTKKPAAKKAAKTKSESTSKARAAVPSTAKTS
AVKTSPTKASAAKAPAKKSAGTT
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgtcattgtggagtcgccggcgaaagccaagacgatcaacaagtatttgggc
tcgtcctatgaggttctggcctcattcggccatgtccgcgacttgccggcgaagaacggt
tccgtcgatcccgacgccaatttcaagatgatctgggagatcgaccccaaggcggccggc
cggctcaacgatatcgccaagtctctgaagggcgccgaccgcctgattctggcaaccgac
cctgatcgtgagggcgaagccatctcctggcacgtgctggaggtcttgaaagagaagcgc
gcgctgaaggatcagaagatcgagcgcgtggtgttcaacgccatcaccaagcaggccgtc
acggacgcgatgaagcatccgcgccagatcgacggcgcgctggtcgacgcctatatggcg
cgccgcgcgctcgactatctggtcggcttcaccctctccccggtgctgtggcgcaagctg
ccgggcgcccgctcggccggccgcgtgcagtcggtggcgctgcggctggtctgcgaccgc
gagctcgaaatcgagaagttcgtcgcccgcgagtactggtcgctgatcgcgacattgctg
acgccgcgcggcgatgccttcgaggcgcgcctcgtcggcgccgacggcaagaagatccag
cggctcgatatcggcaccggggcggaggccgaagacttcaagaaggcgctggagcttgcg
acctacgccgtgaccgcggtcgatgcgaaacccgcgcgccgcaatccgcaggcgcccttc
accacctcgaccttgcagcaggaagccagccgcaaatacggctttgcgcccgcgcacacc
atgcgcatcgcgcagcgtctttatgaaggcatcgacatcggcggcgagaccaccggtctc
attacttatatgcgtaccgacggcgtgcagatcgatccgtccgcgatcacccaggcgcgc
aaggtgatcggcgaggattacggcaacgcctacgtgccggacgcgccccgccagtaccag
gccaaggccaagaacgctcaggaagcgcacgaagcgatccgcccgaccgacatgtcgcgc
cgtcccgacagcatgagccgcaggctcgatgcggaccaggcgcggctctatgagctgatc
tggaagcgcaccatcgcgagccagatggaatcggccgagctcgaacgcaccaccgtcgac
atcgccgcgaaggccggcgcccgcacgctggagctgcgcgccaccggtcaggtcatcaag
ttcgacggttttctggcgctctaccaggagggtcgcgacgacgaggaggacgaggattcc
cgccgcctgcccgcgatgagcccgaacgacgcgctgaagcggcagtcgctcgccgtcacg
cagcatttcaccgagccgccgccacgcttctcggaagcgtcgctggtcaagcggatggaa
gagctcggcatcggccggccctcgacctacgcctcgatcctccaggtgttgaaggaccgc
ggctatgtcaagctggagaagaagcgcctgcacggcgaggataagggccgcgtcgtggtc
gctttcctcgaaagcttcttcagccgctacgtcgaatacgatttcaccgccaatctggaa
gagcagctcgaccgcatctccaataacgagatctcctggcagcaggtgctgaaggacttt
tggaccggcttcatcggcgccgtcgacgagatcaaggatctgcgcgtcgcccaggtgctg
gacgtgctcgacgacctgctgggacagcacatctatccgccgcgcaccgatggcggcgac
atcaggcagtgcccgagctgcggtaacggccggctgaatctcaaggccggcaagttcggc
gccttcgtcggctgctcgaactatccggagtgccgctacacccgccagctcgccgccgac
agcgagaccaccgccgaccgttcgctcggccaggatcccgatacgggtcgcgatgtctgg
gtcaaggcgggccgctttggcccctacatccagctcggcgagcagaaagattatgaggaa
ggcgagaagccgaagcgcgcgggcatcccgaagggtacctctccgagcgatgtcgagctc
gagcttgcgctcaagctgttgtcgctgccgcgcgagatcggcaagcatcccgagaccggt
gagccgatcaccgcgggcctcggccgcttcgggcctttcgtgaagcatgagaagacctat
gccagcctggaagccggtgacgaggtgttcgacatcggcctcaatcgcgccgtgacgctg
attgccgagaaggtcgcgaagggcccgagccggcgcttcggcgccgatcccggcaaggcg
atcggcgatcatcccaccctcggcaccgtcaccgtgaagagcggccgttacggcgcctat
gtcaccgccggcggcgtcaacgcgaccatcccggccgagttcgaaaaggacaccgtgacg
ctaccgcaggcgatcgcgctgatcgacgagcgcgccgccaagggcggcggcaaggccaag
aacaccaagacagcgaagaaggcggcgaagccggccaaggccaaaaaagctgcggtgaag
gccgcggacggtgacgcagcgccaaagacgaaaaaaccggccgcgaagaaggcggccaag
accaaatccgaatccaccagcaaggcgcgcgccgccgtgccgtcgaccgccaagacttca
gcagtcaagacgtcgccgaccaaggcatccgccgccaaagctccggccaagaaaagtgcc
ggcacgacttaa
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