Bradyrhizobium genosp. A: ACP2YP_30505
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Entry
ACP2YP_30505 CDS
T11253
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
bgea Bradyrhizobium genosp. A
Pathway
bgea00470
D-Amino acid metabolism
bgea00550
Peptidoglycan biosynthesis
bgea01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bgea00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ACP2YP_30505 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ACP2YP_30505 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bgea01011
]
ACP2YP_30505 (murD)
Enzymes [BR:
bgea01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
ACP2YP_30505 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
bgea01011
]
Precursor biosynthesis
Amino acid ligase
ACP2YP_30505 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
AdoHcyase_NAD
KARI_N
ADH_zinc_N
TrkA_N
adh_short
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
XRZ34422
LinkDB
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Position
complement(6509728..6511125)
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AA seq
465 aa
AA seq
DB search
MIPITSFAGKTVAVFGLGGSGLACCHALKAGGAEVIAADDNADNVAKAAQAGFITADLRN
ISWSNFAALVLAPGVPLTHPVPHWSVLKAREAGVEVIGDIELFCRERRRHAPDAPFIAIT
GTNGKSTTTALIAHLTKVAGYDSQMGGNIGTAILSLEPPRMGRVHVIEMSSYQIDLTPSL
DPSVGILLNVSEDHIDRHGTIGHYAAVKECLVAGVQAGGTSIVGVDDGYCRDIADRLDRA
GKNVVRISVRNPLASGIHVEHGTIVRTAGGARSEVAKLGGIGSLRGLHNAQNAACAAAAA
LAMGISLDVLQDGLRSFPGLAHRMEQVGRRGNVLFVNDSKGTNADATAHALSSFADIFWI
AGGKPKAGGITGLTSFFPRIRKAYLIGEAAQEFSGTLGTVAHEISQTLDVAVEHAARDAE
ASGLTDAVVLLSPACASFDQYRNFEIRGTKFRELVQALPGVKPVV
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgatcccgattacatccttcgccggcaagacggtcgcggtgttcggcctcggcggctcg
gggctcgcctgctgccacgcgctgaaagccggcggcgccgaagtgatcgccgccgacgac
aatgccgacaacgtcgccaaggccgcgcaggccggtttcatcaccgcagatctgcgcaac
atctcctggtcgaatttcgccgcgctcgtgctcgcgcccggcgtgccgctgacccatccg
gtgccgcactggagcgtgctgaaggcgcgcgaggccggcgtcgaggtgatcggcgacatc
gaactgttctgccgtgagcgccgacggcacgcaccggacgcgccgttcattgcgatcacc
ggcaccaacggcaagtcgaccaccacggctttgatcgcgcatctcacaaaggttgcgggc
tacgactcccagatgggcggtaatatcggcaccgcgatcctgtcgctggagccgccgcgc
atgggccgcgtccacgttatcgagatgtcgtcctaccagatcgacctcacgccctcgctc
gatccctccgtcggcatcttgctcaatgtcagcgaagatcacatcgatcgtcacggcacc
atcggacattacgctgcggtgaaggagtgcctggttgcgggcgtgcaagcaggcggcacg
tcgatcgtcggtgtcgatgacggctattgccgcgacatcgccgaccggcttgaccgcgcc
ggcaagaacgtggtgcggatctccgtcaggaatccgctggcgagcggcattcatgtcgag
catggcaccatcgtgcgtaccgcgggcggcgccaggagcgaggttgcaaaactcggcggc
atcggctcgctgcgcggcctgcacaatgcgcagaacgcggcctgcgcggccgccgccgcg
cttgcgatgggcatcagcctggacgtgctgcaggacggcctccgtagctttccgggcctg
gcgcaccgcatggagcaggtcggccgccgcggcaacgtgctgttcgtcaacgactccaag
ggcaccaacgccgacgccaccgcgcatgcgctgtcgtcctttgccgacatcttctggatc
gcgggcggcaagccgaaggcgggcggcatcactggcttgacctccttcttcccgcgcatc
cgcaaggcctatctgatcggcgaagccgcgcaggaattttcaggtacgctcgggacggtg
gctcacgagatcagccagacgctcgatgtcgccgtcgagcacgcggcacgcgacgcggaa
gcttcaggtctcaccgacgcggtcgtgctgctgtcgccggcctgcgcctccttcgaccag
taccgcaacttcgaaatccgcggcaccaagttccgcgaactggtgcaggcgctgccgggt
gtgaagccggtggtgtga
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