Brevibacillus gelatini: AAFJ72_09165
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Entry
AAFJ72_09165 CDS
T11271
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bgel Brevibacillus gelatini
Pathway
bgel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAFJ72_09165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgel03019
]
AAFJ72_09165
Messenger RNA biogenesis [BR:
bgel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AAFJ72_09165
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
XVN72845
LinkDB
All DBs
Position
complement(1860400..1862067)
Genome browser
AA seq
555 aa
AA seq
DB search
MSTQNGTLSIFALGGVYEIGKNMYGIQYGDDIVLIDCGSKFPDESFLGIDLIIPDITYLL
ENHDKVRGLIVTHGHEDHIGGIPYFLKQLNVPVYGTRLTLGLIEIKLKEHGLLQQAELVQ
IDRNSRLALGAMTASFFQTNHSIPDCLGVVFDTPEGKVVHTGDFKFDLTPVHKQTPDLHK
MAAIGQSGVLVLLSESTNAERPGFTPSEKLVGDHLREAFARAKRKIFVSTFASNVYRLQQ
VIDAAHLNNRVLVLLGRSMVNVVQIAQEQGYLHIPEGMLVDTEEANELPPERVAILCTGS
QGEPMAALARLSTGGFRSIKVEAGDTVILSASPIPGNERNVARIVDNLFILGANVVYGSG
TGMHVSGHGSQEELKLMLTLMKPKFFIPIHGEYRMLHQHRLLAEQLGMEPDAIFLINNGD
VVDFKDGAVVQERTIQAGNTLVDGFGIGDVGTVILRDRKHLSEDGILVVVVTRDKTDGKI
ISGPDLISRGFVYGPDSEGLIDEATQIAATALEGLQGERITQWNRMKQALRESIGRFLYA
KTKRRPMILPIIMDV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgagcacacaaaacggcacgctctccatctttgcgctgggaggcgtctatgaaatcggc
aaaaacatgtacggcattcagtatggcgacgacattgtcctgatcgactgcggctccaag
tttcccgatgagagctttttgggtattgacttaatcatccccgacattacctatttgctg
gaaaaccatgacaaagtacgcggcttgatcgtcacgcacgggcatgaggaccacatcgga
ggcatcccgtattttctcaagcaactgaacgtccccgtctacggcacgcgcctgacactc
gggctgattgaaatcaagctgaaagaacacggcttgctgcagcaggcagagcttgtgcaa
atcgaccgcaactccaggctcgccctgggcgcgatgacggccagcttttttcagacgaat
cacagcattcctgattgccttggcgtcgttttcgacacaccggaaggcaaagtggtacat
accggggatttcaagtttgatttgacccccgttcacaaacagacgcccgatttgcacaaa
atggccgcgatcgggcaaagcggcgtgctcgtcctgctgtcggaaagcacgaatgccgag
cgccctggcttcactccttcggaaaagctggtcggcgaccatttgcgcgaggcgtttgcg
cgggccaaacggaaaattttcgtctccacctttgcctccaatgtgtatcggctgcaacag
gtcattgatgccgcccatctgaacaaccgcgtcctggtgctgcttggacgcagcatggtc
aatgtcgttcagatcgcccaggagcaaggctatctgcacattccggaaggcatgctggtc
gatacagaagaagcaaacgagcttccgccggagcgcgtcgccattttgtgcacgggaagc
cagggggaaccgatggccgctttggcccggttatcgacaggaggatttcgcagcatcaag
gtggaggcaggcgacacggttatcctcagcgcctcgcccattcccggcaacgagcgaaat
gtagcgcggatcgtcgacaatttgttcattctcggggcaaacgtggtctatggctcgggc
acgggcatgcacgtctccggccacggcagccaggaagaactgaagctgatgctcacgttg
atgaagccgaaatttttcatcccgatacacggcgagtaccggatgctgcaccagcaccgt
ctgcttgccgaacaactcggcatggagccggacgcgatttttctcatcaataacggcgac
gtggtggacttcaaggatggggccgtcgtacaggaacgaaccattcaggccggaaatacg
ctggttgacggctttggcatcggcgacgtcggcacggtcattttgcgcgaccgcaagcat
ctgtctgaggacggcattctcgtcgtggtcgtcacgcgcgacaaaacagacggcaaaatc
atttccggtcctgacctcatctcacgcgggtttgtgtacggccccgattcggaagggctg
attgacgaggcgacacagatcgcagcaaccgcgcttgaaggtttgcagggtgagagaatc
acccagtggaatcgcatgaagcaagcgctgcgcgagtcgatcggacggtttttgtacgcg
aaaacaaagcgcaggccgatgattttgccgatcattatggatgtgtaa
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