KEGG   Brevibacillus gelatini: AAFJ72_09165
Entry
AAFJ72_09165      CDS       T11271                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
bgel  Brevibacillus gelatini
Pathway
bgel03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bgel00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AAFJ72_09165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bgel03019]
    AAFJ72_09165
Messenger RNA biogenesis [BR:bgel03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AAFJ72_09165
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: XVN72845
LinkDB
Position
complement(1860400..1862067)
AA seq 555 aa
MSTQNGTLSIFALGGVYEIGKNMYGIQYGDDIVLIDCGSKFPDESFLGIDLIIPDITYLL
ENHDKVRGLIVTHGHEDHIGGIPYFLKQLNVPVYGTRLTLGLIEIKLKEHGLLQQAELVQ
IDRNSRLALGAMTASFFQTNHSIPDCLGVVFDTPEGKVVHTGDFKFDLTPVHKQTPDLHK
MAAIGQSGVLVLLSESTNAERPGFTPSEKLVGDHLREAFARAKRKIFVSTFASNVYRLQQ
VIDAAHLNNRVLVLLGRSMVNVVQIAQEQGYLHIPEGMLVDTEEANELPPERVAILCTGS
QGEPMAALARLSTGGFRSIKVEAGDTVILSASPIPGNERNVARIVDNLFILGANVVYGSG
TGMHVSGHGSQEELKLMLTLMKPKFFIPIHGEYRMLHQHRLLAEQLGMEPDAIFLINNGD
VVDFKDGAVVQERTIQAGNTLVDGFGIGDVGTVILRDRKHLSEDGILVVVVTRDKTDGKI
ISGPDLISRGFVYGPDSEGLIDEATQIAATALEGLQGERITQWNRMKQALRESIGRFLYA
KTKRRPMILPIIMDV
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgagcacacaaaacggcacgctctccatctttgcgctgggaggcgtctatgaaatcggc
aaaaacatgtacggcattcagtatggcgacgacattgtcctgatcgactgcggctccaag
tttcccgatgagagctttttgggtattgacttaatcatccccgacattacctatttgctg
gaaaaccatgacaaagtacgcggcttgatcgtcacgcacgggcatgaggaccacatcgga
ggcatcccgtattttctcaagcaactgaacgtccccgtctacggcacgcgcctgacactc
gggctgattgaaatcaagctgaaagaacacggcttgctgcagcaggcagagcttgtgcaa
atcgaccgcaactccaggctcgccctgggcgcgatgacggccagcttttttcagacgaat
cacagcattcctgattgccttggcgtcgttttcgacacaccggaaggcaaagtggtacat
accggggatttcaagtttgatttgacccccgttcacaaacagacgcccgatttgcacaaa
atggccgcgatcgggcaaagcggcgtgctcgtcctgctgtcggaaagcacgaatgccgag
cgccctggcttcactccttcggaaaagctggtcggcgaccatttgcgcgaggcgtttgcg
cgggccaaacggaaaattttcgtctccacctttgcctccaatgtgtatcggctgcaacag
gtcattgatgccgcccatctgaacaaccgcgtcctggtgctgcttggacgcagcatggtc
aatgtcgttcagatcgcccaggagcaaggctatctgcacattccggaaggcatgctggtc
gatacagaagaagcaaacgagcttccgccggagcgcgtcgccattttgtgcacgggaagc
cagggggaaccgatggccgctttggcccggttatcgacaggaggatttcgcagcatcaag
gtggaggcaggcgacacggttatcctcagcgcctcgcccattcccggcaacgagcgaaat
gtagcgcggatcgtcgacaatttgttcattctcggggcaaacgtggtctatggctcgggc
acgggcatgcacgtctccggccacggcagccaggaagaactgaagctgatgctcacgttg
atgaagccgaaatttttcatcccgatacacggcgagtaccggatgctgcaccagcaccgt
ctgcttgccgaacaactcggcatggagccggacgcgatttttctcatcaataacggcgac
gtggtggacttcaaggatggggccgtcgtacaggaacgaaccattcaggccggaaatacg
ctggttgacggctttggcatcggcgacgtcggcacggtcattttgcgcgaccgcaagcat
ctgtctgaggacggcattctcgtcgtggtcgtcacgcgcgacaaaacagacggcaaaatc
atttccggtcctgacctcatctcacgcgggtttgtgtacggccccgattcggaagggctg
attgacgaggcgacacagatcgcagcaaccgcgcttgaaggtttgcagggtgagagaatc
acccagtggaatcgcatgaagcaagcgctgcgcgagtcgatcggacggtttttgtacgcg
aaaacaaagcgcaggccgatgattttgccgatcattatggatgtgtaa

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