Brevibacillus gelatini: AAFJ72_12535
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Entry
AAFJ72_12535 CDS
T11271
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bgel Brevibacillus gelatini
Pathway
bgel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAFJ72_12535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgel03019
]
AAFJ72_12535
Messenger RNA biogenesis [BR:
bgel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AAFJ72_12535
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
XVN69118
LinkDB
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Position
complement(2632846..2634522)
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AA seq
558 aa
AA seq
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MAKSNHSVLIFALGGVGEIGKNMYVVQSGDDIVVIDAGLKFPEEEMLGIDMVIPDITYLE
ENRDKVRGIIITHGHEDHIGGLSYVLKHLKVPVYATKLTLGLIDAKLKEAGILNETKRVL
INSDSEVVLGSMKATFFRVNHSIPDCVGVCLETPEGYVVHTGDFKFDQTPINNQTADLAK
MAMIGDRGVLCLLSDSTNAERPGFTGSERSVGAAIKDVFSKATGRIVVSTFASNVHRIQQ
VVDAAVQFNRKLTVVGRSMQNVINISRELGYLFVPEGLIVESDEINKLPAEQVVILSTGS
QGEPMSALTRMARSAHRKIDILPGDTVIIAATPIPGNEKYVARTIDQLSRIGAEVIYGGH
GPNGTVHVSGHGSQEELRLMLNLMKPKYFIPIHGEYRMLKMHSLLAEQVGIPEENIFLLD
NGDTVEISGGRARYGPKVHAGNVLIDGLGVGDVGNIVLRDRKLLSQDGILVVVVTLSKQN
GTILSGPDIISRGFVYVRESEELLDEANRIVTQTLVKCMEENVNEWSSLKNNVKESLGRY
LFEQTRRRPMILPIIMEV
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaagtcgaatcactctgttctcattttcgccctgggcggagtcggcgagattggg
aaaaatatgtacgtggtacaaagcggggacgacatcgtagtgattgatgccggattgaaa
ttcccggaagaggaaatgctgggaattgacatggtgattccggacatcacctacctggag
gagaaccgcgacaaagttcggggtatcattatcacgcatggacacgaagaccatatcggc
ggcctcagctatgtgctgaagcatttgaaagtcccggtctatgcgacaaaacttaccctt
ggcctgattgatgcaaaattgaaagaagcgggtattctaaacgagacgaagcgcgtattg
attaacagcgattcagaggtcgtcctgggaagcatgaaagcgaccttcttccgggtgaac
cacagtattccggattgtgtgggagtatgcctggaaacgcctgaaggctacgtcgtccac
acaggagacttcaagttcgatcaaacaccgatcaacaaccagactgccgatctggcaaaa
atggccatgattggcgatcggggtgttttgtgcttgctgtctgacagtacgaatgcggaa
cgtcccggatttaccggatcggaacgctctgtaggcgctgcgatcaaagacgtctttagc
aaggcaacggggcgaatcgtcgtctctaccttcgcgtcgaacgtacaccgcatccagcaa
gttgtggatgctgccgtgcagttcaaccgcaagctgacggtcgtcggccggagcatgcaa
aacgtcatcaatatcagcagagaactggggtatttgttcgttccggaaggtttgattgtc
gagagcgacgaaatcaacaagttgcccgctgagcaagtcgttattttatctactggcagt
caaggagagccaatgtctgcgctcacacgcatggcccgatccgcccatcggaaaattgac
atccttccaggagatacggtcattattgcggcgaccccgattccgggaaatgaaaagtac
gtcgcacgcacgattgaccagctttcgagaattggcgctgaagtgatttacggcggccat
ggacccaacggaaccgtccacgtctccggtcatggcagccaggaagaactgcggctgatg
ctgaatttaatgaagcctaagtactttattcccattcacggcgaataccggatgctcaaa
atgcactcgctgctggctgaacaggtgggcattcccgaggagaacatctttttgctggat
aacggcgacacggtggaaatctccggaggccgggcgcgttatggcccgaaagtccacgca
ggcaatgtcctgattgacggcctgggtgtcggtgatgttggaaacatcgtacttagagat
cgcaaactgctttcccaagatggcatactggtagttgtcgttacactcagcaaacaaaat
ggcacgattctgtctggtccagacatcatctctcgcggtttcgtctacgtgcgtgaatcc
gaggaactgctggatgaagcgaatcgcatagtgacccaaacacttgtcaagtgcatggaa
gaaaatgtaaatgaatggtcatccctcaaaaacaacgtaaaagaatcattgggacgttat
ttgttcgagcaaactcgtcgccgtccgatgatcctgccgattatcatggaagtgtaa
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