Brevibacillus gelatini: AAFJ72_12595
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Entry
AAFJ72_12595 CDS
T11271
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bgel Brevibacillus gelatini
Brite
KEGG Orthology (KO) [BR:
bgel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bgel03016
]
AAFJ72_12595 (truB)
Enzymes [BR:
bgel01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AAFJ72_12595 (truB)
Transfer RNA biogenesis [BR:
bgel03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AAFJ72_12595 (truB)
Prokaryotic type
AAFJ72_12595 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
XVN69129
LinkDB
All DBs
Position
complement(2646055..2646981)
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AA seq
308 aa
AA seq
DB search
MSNAHGVLVIDKPAGMTSHDCVARIRRLYGTKKVGHTGTLDPDVTGVLPICIGHATRLVE
YLQDLPKRYKVVMRLGSSTTTEDASGEVLEQAKVDAAAITTERIEQLLQSFLGEIEQVPP
MFSAVKVNGKRLYDLAREGAVVERKPRKVTLYELTLHEIKADGDSVDISFTCTCSKGTYM
RTLCVDLGRALGYPAHMKLLRRIKSGPFAEEEAIPLHVLEERAANGEDLSRHLVSISQAI
SFLPSYQVKPERIRAVRNGLATALPGVNAEVGSLICLFAGEELLGIHRVCRGDKGLFAKA
EKVFPAEV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgcgcacggtgtgctggtaatcgacaagccggcgggcatgacctcgcacgat
tgtgtggcgcgcatccgccggctgtatggaacgaaaaaggtaggacatacgggaacgctc
gaccccgacgtgacaggtgtcctgccgatctgtatcggccatgcgacgcgcctggtagag
tatttgcaggatttgccgaagcgctacaaagtagtcatgcggctcggcagctccacgacg
acggaggatgcttccggggaagtgctggagcaggctaaagtagacgcagccgcgatcacg
accgaacgtatcgagcaattgctgcaatcgtttttgggagaaatcgagcaggtgccgccg
atgttttctgcggttaaagtaaacgggaagcggctctacgatctggcaagagaaggcgcc
gtcgttgagcgcaagccgcgcaaagtcacactgtacgagctgacgcttcacgagatcaag
gcagacggcgacagcgtcgacatctcgtttacctgcacctgttcaaaagggacttacatg
cgcaccttatgtgttgaccttggtcgcgctctgggttatcctgcccatatgaagctgctt
cggcgaatcaagagcggaccgttcgcagaggaggaggcgattcctcttcatgtactggag
gagcgggctgcgaacggggaggatctctcccgtcatcttgtctccatctcacaggcgatt
tcatttttgccgtcttatcaggtcaaaccggagcgaatccgtgcggtgcgcaatggactg
gcgactgcgctgcccggagtcaatgccgaggtaggcagcctgatctgcctgtttgctggc
gaagagttgctggggattcatcgcgtgtgccgtggggacaaaggtcttttcgccaaagca
gaaaaagtctttccagcagaggtgtaa
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