Brevibacillus gelatini: AAFJ72_14505
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Entry
AAFJ72_14505 CDS
T11271
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
bgel Brevibacillus gelatini
Brite
KEGG Orthology (KO) [BR:
bgel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bgel03016
]
AAFJ72_14505
Enzymes [BR:
bgel01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
AAFJ72_14505
Transfer RNA biogenesis [BR:
bgel03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
AAFJ72_14505
Prokaryotic type
tRNA splicing ligases
AAFJ72_14505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
XVN69489
LinkDB
All DBs
Position
complement(3015946..3017382)
Genome browser
AA seq
478 aa
AA seq
DB search
MKMIEHGNCHREVQLGAGSVHVFANDEVFATFGQRVFEMAEHNLRIPRNVYFSYTPDAHV
GVGTCIGTTAVWNMRDGFVSPSIVGSDIGCGMRVHLTPLHRDELKDKQLKRELIQAIETY
VPTTERGQTSYTDIPLEEVVKYGLNGLPAAYLAEPADEPGGVSRSLTHVEKHTFAFDHTA
LAHIPAKSWQRAWGQLGTLGGGNHFIEIQSLEIADDNREIAQEWGLFDGQVVIMIHSGSR
AWGAMLGRDYTKSFKEAMFKWGIENPEPSLVYAPIDTEEGQRYLNLMYSALNYAVVNRHL
IGYAVERAFQDVLGKAVSTPVLYDLMHNYALEEYHRNTPMLVHRKGATKALPAGHFQNPK
AYKKTGHPALIPGSMGTSSYIMVGAAGGAKNFYSICHGAGRIRSRKATKEAVTINEFEQA
LRIGQEDEILVNHRSLEAILDECPQAYKDVDQIIDSVVGAKLATVVAKCKPLIAIKGV
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgatcgagcacggaaattgccatcgggaagtgcagcttggcgctggctccgtt
cacgtgtttgccaatgacgaagtatttgccacttttggacagcgcgtgttcgagatggcg
gaacataacttgcgcatcccgcgcaatgtgtacttttcctatacgccggatgcccatgtc
ggcgtcgggacgtgcatcgggacaacggccgtctggaatatgcgcgacgggtttgtgtct
ccctcgattgtcggctcggacatcggctgcggtatgcgcgtgcacctgacaccgctgcac
cgggatgagctgaaagacaaacagttgaagcgcgagctgattcaggcgattgaaacgtac
gtgccgacgacagagcgcgggcaaacgagctacaccgatattcccctcgaagaagtggtg
aagtacggcctgaacggtctgccagccgcgtatttggcggagccggcggatgagccgggc
ggggtgagccgctccctgacccatgtggaaaagcatacgtttgccttcgatcacacggcg
cttgcgcacattcccgccaagtcgtggcaaagagcgtggggacagctcggaacgcttggc
ggcgggaatcattttatcgaaatccagtcgctggaaatcgcggacgacaaccgggagatc
gcgcaggagtggggcttgttcgacgggcaggtcgtcatcatgattcactccggttcccgc
gcctggggggccatgctcggacgagattatacgaaaagcttcaaggaagcgatgttcaaa
tgggggattgaaaatccggaaccgagcctggtctatgccccgattgatacagaggaaggg
cagcggtatttgaacctgatgtactcggcattgaattacgccgtggtgaaccgccatctg
atcggctacgcggtcgagcgggcttttcaggacgtactgggaaaagccgtttccactccg
gtcctgtacgatttgatgcacaattacgcgctggaggaatatcaccgcaacacgccgatg
ctcgttcatcgcaaaggggcaaccaaggcgctcccggctggtcacttccaaaatccgaag
gcgtataaaaagaccggacatccggcattgattccaggctcgatgggaacatcgtcctac
atcatggtcggtgcggcaggcggcgcgaaaaacttttattcgatctgccatggcgcgggc
cgcatccgctcgcgcaaggccacgaaagaggcggtcacgatcaatgagttcgagcaagcg
ctgcgcatcggccaggaggacgaaattttggtcaaccaccgctctctggaagcgattctc
gatgaatgtccgcaggcgtacaaagacgtggatcagattatcgattccgtcgtgggcgca
aagctggcgacagtcgtagccaagtgcaaaccactcatcgcaatcaaaggagtttga
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