Brevibacillus gelatini: AAFJ72_15060
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Entry
AAFJ72_15060 CDS
T11271
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
bgel Brevibacillus gelatini
Brite
KEGG Orthology (KO) [BR:
bgel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgel03019
]
AAFJ72_15060
Messenger RNA biogenesis [BR:
bgel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AAFJ72_15060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
XVN69590
LinkDB
All DBs
Position
complement(3121818..3122768)
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AA seq
316 aa
AA seq
DB search
MTKYLLDYQEGERVVAFCLVKNKEAGVASNQSEYLNLELGDRSGTIMAKLWDVSPEMKEW
ITVKSVVKIDALVQVYRGKKQLVIQRIRPATASDEVMMESLIPVSPVPVDELWAKLEATV
DSLKSSTLKAIIREVLSTEEIRERLRHFPAGVRMHHNYYHGLLEHIVSLLTAAQSLLPLY
PQVDRDVLYATCILHDIGKLYELSDPIAPDYTTPGQLIGHLIMGVEMVSGICRKLDIPLG
DAEVLHLKHCILSHHGEVENGWGSAVSGKTPTAILFHYLDQIDSKMNALGQTLADMSEDE
EWAYAGALRRKVWRGY
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatatttgcttgactatcaagagggagagcgggttgtcgctttttgcctggtg
aagaacaaggaagccggagtcgcgagcaaccagagcgagtatttgaatctggagctgggg
gatcgctccgggacgatcatggcgaagctgtgggatgtcagcccggaaatgaaagagtgg
atcacggtcaaatcggtggtgaaaatcgacgcgctcgtccaggtgtatcgggggaagaag
caactggtgatccagcgcatccgtccggccacggcatcagacgaggtcatgatggaatcg
ctcatccccgtttcgccagttccggtggatgagctgtgggcgaagctggaagcgacagtg
gacagcctcaagagcagcacgctcaaggcgatcatccgcgaggtgctctctacagaggag
atcagggagcggctccgccactttccggcaggggtgcggatgcaccacaactactatcac
ggacttttggagcatatcgtctcgctcttgacagcggcccagagcttgctgccgctctac
ccgcaggtggaccgggacgtcttgtacgcgacctgcattctgcacgatattggcaagctg
tacgagctgtcggacccgattgcgccggattacaccacgccaggccagttgatcggccat
ctgatcatgggcgttgagatggtgagcggcatttgccgcaagctagacattccgctgggg
gatgccgaagtgctgcatctgaagcattgcatcctgagccatcacggggaagtggaaaac
ggctggggaagcgcagtatccggcaagacgccgactgccatcctgttccactacctcgac
cagattgacagcaaaatgaatgcgctgggacagacgcttgccgacatgagcgaagacgaa
gagtgggcgtacgccggggcgctccgccgaaaagtttggcgcggctattag
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