Brevibacillus gelatini: AAFJ72_16320
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Entry
AAFJ72_16320 CDS
T11271
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bgel Brevibacillus gelatini
Pathway
bgel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAFJ72_16320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgel03019
]
AAFJ72_16320
03009 Ribosome biogenesis [BR:
bgel03009
]
AAFJ72_16320
Enzymes [BR:
bgel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AAFJ72_16320
Messenger RNA biogenesis [BR:
bgel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AAFJ72_16320
Ribosome biogenesis [BR:
bgel03009
]
Prokaryotic type
rRNA helicases
AAFJ72_16320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Flavi_DEAD
GvpG
Motif
Other DBs
NCBI-ProteinID:
XVN69811
LinkDB
All DBs
Position
complement(3381938..3383398)
Genome browser
AA seq
486 aa
AA seq
DB search
MAKSFASFGFRPELMQGIQDLYYKEPTPIQEEAIPLILEGKDVIGQAQTGTGKTAAFMLP
ILNRLDAGKRDIQALILTPTRELSIQIAKEVEKLGKHLHVNVLSLHGGTDIDRQLSKLKS
TVHIVVGTPGRVLDHMQRGSLHFGRISTLVLDEADKMMEMGFLEDVEQVIVHTPSQRQVL
LFSATMPDMVKRLAHRFMKQPPHIKIEGKQKTVEKIEQFYYVVNQSDKTDALVDVLEQEQ
PFLTIVFANTQVRVQQLTARLQENGFQAQALYGDLSQSKREQLMRHFREMRFQYLVATDI
AARGLDVEGVSHVINYDLPNDVESYIHRVGRTGRAGQSGKAISLISPRQKNLMSRFAKAT
KASIEERILEPGRHLDAGRRQRALEREAHFIELRAKQAKEQQKEKEKEFAPVREALKKKA
KVKPGYKKKLARELEELQMRYEKNRRKAEAIAARKAGKTVKPADAKKAGRGKAGRAAKGA
RPFRQN
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatcgtttgcgtcttttggctttcgaccggagctgatgcaagggattcaagac
ctgtactataaagaaccgaccccgatccaggaggaagcgattccgctgattctggaggga
aaagacgtgattggacaagcgcagaccggaacagggaaaacagcggcgttcatgctgccg
atcctgaaccgtctggatgcgggcaagcgcgacattcaggcgctgattctcaccccgacg
cgcgagctgtccattcagatcgccaaagaagtggagaagctgggcaagcatcttcatgta
aatgtgctgtcgctgcacggcggaaccgacattgacagacagttgagcaagctgaaatcg
actgtacacatcgtcgtcggtacgccaggacgcgtgctggatcacatgcagcgcggctcg
ctgcacttcgggcggatttccacgctcgtgctggatgaggcggacaagatgatggagatg
ggctttttggaggatgtagagcaagtcatcgtccatacgccttcccagcgtcaagtgctg
ctgttctccgcaaccatgccggatatggtgaagcggctggctcatcgcttcatgaagcaa
ccgccgcacatcaagatcgaaggcaagcaaaagaccgtggaaaaaatcgagcagttttac
tacgtcgtcaaccaaagcgacaagacggatgcgctcgtggacgttttggagcaggagcag
ccgtttttgaccatcgtttttgccaatacgcaagtgcgcgtgcagcagctcactgcccgc
ctgcaggaaaacggatttcaggcgcaagcgttgtacggggacctgtcgcaaagcaagcgc
gagcagctaatgcggcatttccgcgagatgcgcttccagtatctggtggcgacggatatt
gccgcgcgcgggctggatgtcgagggcgtctcgcacgttatcaactacgatttgccaaat
gacgtggagagctacattcaccgcgtaggccggacagggcgcgccggacagagcggaaaa
gcaatctcgctcatttcgccgcgccagaaaaacttgatgagccgcttcgccaaagcgacg
aaggcgtcgattgaagagcgcattctggagcctggccgccatctggatgcaggccgtcgc
cagcgtgcactggagcgggaagcccacttcatcgagctgcgcgccaaacaggcaaaagag
cagcaaaaagaaaaagagaaggagtttgctcctgttcgcgaagctttgaagaaaaaagcc
aaagtgaagccgggctacaaaaagaagctggcgcgcgaactggaagaactccagatgcgc
tatgagaaaaaccgcagaaaggctgaggcgattgccgcgcgcaaagcaggcaagaccgta
aagcccgctgacgccaaaaaagcgggaagaggcaaagcaggccgcgctgccaaaggggca
agaccgttccgccagaattag
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