Brevibacillus gelatini: AAFJ72_20570
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Entry
AAFJ72_20570 CDS
T11271
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bgel Brevibacillus gelatini
Pathway
bgel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAFJ72_20570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgel03019
]
AAFJ72_20570
03009 Ribosome biogenesis [BR:
bgel03009
]
AAFJ72_20570
Enzymes [BR:
bgel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AAFJ72_20570
Messenger RNA biogenesis [BR:
bgel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AAFJ72_20570
Ribosome biogenesis [BR:
bgel03009
]
Prokaryotic type
rRNA helicases
AAFJ72_20570
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Helicase_RecD
CobA_CobO_BtuR
AAA_22
Motif
Other DBs
NCBI-ProteinID:
XVN70600
LinkDB
All DBs
Position
complement(4290714..4292225)
Genome browser
AA seq
503 aa
AA seq
DB search
MATFYDFGLHHAIVRALGNMGFEEATAIQEQTVPVALQGRDLIGQAQTGTGKTAAFGIPL
VERLDENSGHIQGVVLTPTRELAVQVAEEINKIAQFKNISALPIYGGQDITRQIKALKKR
PQIIVATPGRFMDHMRRRTIRLDAIQIVVLDEADEMLNMGFIDDIKEILQEVPENRQTLL
FSATMPRAIQEIAQQFMTEPTLISVKPKEVTVPNIEQQYMEVAEKQKFDVLCRLLDIHSP
ELAIVFGRTKRRVDELSEALTKRGYGAEGIHGDLNQAKRDSVLRKFKEGTIEVLVATDVA
ARGLDISGVTHVFNFDIPQDSESYVHRIGRTGRAGKTGLAITFVTSREIDHLRLIERATN
RRMERRSVPTMAEALEGQQRLTVEKILEASGREDLSAYKTLAEQLLEDIDSVTLVSAALK
LLTKEPDTTPVRLTEEAPLRVGKKKMFPKGKGGYGFGSGFGGKRPPRPRSGEFRPRSGDS
RHRGGESRSRSSESAGRPYNKQR
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
ttggctacattttatgattttggtttgcatcatgcgattgtaagagcgcttggcaacatg
ggattcgaagaggcgacggccattcaggagcaaacggttccggttgccctgcaaggccgc
gacttgatcggacaggcgcaaacagggacaggaaaaacggctgcgttcgggattccgctc
gtggaacggctcgatgaaaacagcggccacattcaaggggttgtcctgacgccaacccgt
gagctggctgtgcaggtagcagaggaaatcaacaagatcgcccagttcaaaaacatttcc
gcgctgccgatctacggcggtcaggacattacccgccagatcaaggcgctgaaaaagcgt
ccgcaaattatcgtggccacaccgggccgctttatggaccatatgcgcagaagaacgatt
cgcctcgatgcgatccagattgtcgtactcgacgaagcggatgaaatgctgaacatgggc
ttcattgacgatatcaaggaaattttgcaagaagtgcctgagaatcgtcaaacgctgctg
ttctctgcgaccatgccgcgagcgattcaggaaattgcccagcagttcatgaccgaaccg
acactgatttccgtcaagccgaaggaagtaacggtaccaaacattgaacagcaatatatg
gaagtagccgagaaacaaaaattcgacgtgctttgccgcttgctcgatattcactcccct
gagctggcgattgttttcgggcgcaccaagcgtcgcgtggatgagctgtccgaggcgctg
accaagcgcggctacggcgcggaaggaatccacggcgatctgaaccaggcaaaacgcgac
agcgtgctgcgcaagttcaaggaaggcacaatcgaggtgctggtggcgacagacgttgct
gcccgcggtctggatattagcggcgtcacgcacgtattcaacttcgacattccgcaagac
tccgagagctacgtgcaccgcatcggccgtactggccgggcagggaagacgggtctggca
atcacgtttgtcacttcccgggaaatcgaccatctgcggctgatcgagcgcgcgacaaac
cgccgcatggagcgccgctccgtgccgacgatggcggaagcgctggaaggccagcaacgt
ttgaccgtggagaaaattttggaggcgtccggccgcgaagacttgagcgcctacaaaacg
ctggcagagcagttgctggaggatattgattctgtgacgctcgtgtctgctgccctcaag
ctgctgaccaaagagccggatacgactccggttcgcctgaccgaagaagcgcctctgcgc
gtaggcaagaaaaagatgttcccgaaaggaaaaggcgggtacggttttggctccggcttt
ggcggcaaacgtccccctcgcccgcgcagcggagagttccgtccgcgcagcggcgattcc
cgtcatcgcggcggcgagtctcgctctcgcagcagcgagtcggcaggaagaccgtataac
aagcagcggtaa
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