Bradyrhizobium genosp. P: ACP2YO_00330
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Entry
ACP2YO_00330 CDS
T11254
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bgep Bradyrhizobium genosp. P
Pathway
bgep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACP2YO_00330 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgep03019
]
ACP2YO_00330 (pnp)
03016 Transfer RNA biogenesis [BR:
bgep03016
]
ACP2YO_00330 (pnp)
Enzymes [BR:
bgep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACP2YO_00330 (pnp)
Messenger RNA biogenesis [BR:
bgep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACP2YO_00330 (pnp)
Transfer RNA biogenesis [BR:
bgep03016
]
Prokaryotic type
tRNA degradation factors
ACP2YO_00330 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
DUF5813
Tricorn_2nd
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
XRZ27660
LinkDB
All DBs
Position
66078..68234
Genome browser
AA seq
718 aa
AA seq
DB search
MFNTHSVEIDWGGRPLKLETGKIARQADGAVMATYGETVVLATVVAAKTPREGVDFLPLT
VDYQEKTYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVDGWRNETQVIVTVLSH
DMENDPDIVALVASSAALTLSGAPFKGPIGAARVGFANDEFILNPTLDEMTETQLDLVVA
GTADAVLMVESEAKELNEDVMLGAVMFGHRHFQPVINAIIELAEKAAKEPREVTTIDNSE
IEKEMLGFAEQDLRKAYAIPVKQERYAAVGAVKEKVLAHFFPEGQEPKYDKLRVAGVFKE
LEAKIVRWNILDTGKRIDGRDAKTVRNIIAEAGVLPRAHGSALFTRGETQAVVVTTLGTG
EDEQYIDALAGTYKETFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHH
EFPYTIRVVSEITESNGSSSMASVCGASLSLMDAGVPLKRPTAGIAMGLILEGQRFAVLS
DILGDEDHLGDMDFKVAGTEQGITSLQMDIKIEGITEEIMKVALGQAKEGRIHILGEMSK
ALTAARAELGEYAPRIETFKIATDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS
NDGEAMKAAIKWIKSIASDPEIGQIYEGTVVKVMEFGAFVNFFGAKDGLVHISQLASARV
QKTSDVVKEGDKVKVKLLGFDDRGKTRLSMKAVDQQTGEDLEAKQKTDAPAQREAAGE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatactcattccgtcgagatcgactggggtggacgtcccctcaagcttgaaacc
ggcaagatcgcccgtcaggccgacggcgccgtgatggcgacctatggcgagaccgtggtg
ctcgccactgtcgttgcggcgaagacgccgcgcgaaggcgtcgacttcctgccgctcacg
gtcgattaccaggagaagacctatgccgcgggccgcatccccggcggctacttcaagcgc
gagggacgtccgaccgaaaaggagacgctggtctcccgcctgatcgaccgtccgatccgt
ccgctgttcgtcgacggctggcgcaacgagacccaggtgatcgtcaccgtgctctcacac
gacatggaaaacgatcccgatatcgtggcgctggtggcctcctccgcggcgctgacgctg
tcgggcgcgcccttcaagggtccgatcggcgcggcgcgcgtcggtttcgccaatgacgag
ttcatcctcaacccgacgctggacgagatgaccgagacccagctcgacctcgtcgtcgcc
ggcaccgccgacgccgtgttgatggtggagtcggaagccaaggagctcaacgaagacgtg
atgctcggcgcggtcatgttcggccaccgccacttccagccggtcatcaacgcgatcatc
gagctcgccgagaaggccgccaaggagccgcgcgaggtcaccacgatcgacaattcggag
atcgagaaggagatgcttgggttcgccgagcaggatctccgaaaggcctatgcgatcccg
gtgaagcaggaacgctatgccgcggtcggcgccgtcaaggagaaggtgctcgcgcatttc
ttcccggaaggccaggagccgaaatacgacaagctccgcgttgccggcgtgttcaaggaa
ctggaagccaagatcgtccgctggaacatcctcgacaccggcaaacgcatcgacggccgt
gacgccaagactgtgcgcaacatcatcgccgaagccggcgtgctgccgcgcgcccacggt
tcggcgctgttcactcgcggcgagacccaggctgtggtggtgaccacgctcggcaccggc
gaggacgagcagtacatcgacgcgctggcgggaacctacaaggaaacgttcctactgcac
tacaacttccctccctactcggtcggtgaaaccggacgcctcggcggtaccaagcgccgc
gagatcggccatggcaagctcgcctggcgcgcgatccatccggtgctgccgccgcatcac
gagttcccctatacgatccgcgtggtttcggagatcaccgagtcgaacggctcatcgtcg
atggcttcagtgtgcggcgcctcgctgtcgctgatggatgctggcgtgccgctgaagcgg
ccgaccgccggtatcgccatgggcctgatcctcgagggtcagcgcttcgcggtgctgtcg
gacattctcggtgacgaagatcatctcggcgacatggacttcaaggtcgccggcaccgag
cagggcatcacctcgctgcagatggacatcaagatcgagggcatcaccgaggagatcatg
aaggtcgcgctcggacaggccaaggaaggccgcatccatatcctgggtgagatgtccaag
gcgttgaccgcagcgcgtgccgagctcggcgaatacgcgccgcgcatcgagaccttcaag
atcgccaccgacaagattcgcgaagtgatcggcaccggcggcaaggtgatccgcgagatc
gtcgagaagaccggcgccaaggtcaacatcgaggacgacggcaccgtgaaggtcgcctcc
aatgacggcgaagcgatgaaggccgcgatcaagtggatcaagtcgatcgcgtcggatccg
gagatcggccagatctatgagggcaccgtcgtcaaggtgatggagttcggcgccttcgtg
aacttcttcggcgccaaggacggtctggtccacatcagccagctcgcttcggcgcgcgtg
cagaagacctccgacgtcgtcaaggaaggcgacaaggtcaaggtcaagctgctcggtttc
gacgatcgcggcaagacccggctctcgatgaaggcggtcgaccagcagaccggcgaagac
ctcgaagccaagcagaagaccgacgcacccgcccagcgcgaagccgccggcgagtaa
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