Bradyrhizobium genosp. P: ACP2YO_00515
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Entry
ACP2YO_00515 CDS
T11254
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
bgep Bradyrhizobium genosp. P
Brite
KEGG Orthology (KO) [BR:
bgep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgep03032
]
ACP2YO_00515
03036 Chromosome and associated proteins [BR:
bgep03036
]
ACP2YO_00515
03400 DNA repair and recombination proteins [BR:
bgep03400
]
ACP2YO_00515
DNA replication proteins [BR:
bgep03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ACP2YO_00515
Chromosome and associated proteins [BR:
bgep03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
ACP2YO_00515
DNA repair and recombination proteins [BR:
bgep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
ACP2YO_00515
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
XRZ27692
LinkDB
All DBs
Position
complement(111114..111437)
Genome browser
AA seq
107 aa
AA seq
DB search
MIKSELVQRIAEHNPHLYQRDVENIVNAILDEIVAALARGDRVELRGFGAFSVKHRPARA
GRNPRTGEHVPVDQKSVPFFKTGKEMRERLNRDEAEAPEVDAPKADA
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaatccgaacttgttcagcgtatcgccgagcacaacccgcacctctatcagcgg
gatgtcgagaacatcgtgaatgcgattctcgatgagatcgtcgccgcgctggcccgcggc
gaccgcgtcgagctgcgcggttttggcgcgttttcggtaaagcaccgtccggcacgggcg
ggccgcaatccgcgtaccggcgagcacgtgccggtcgatcagaagagcgtgccgttcttc
aagaccggcaaagagatgcgcgagcgtctcaatcgcgacgaagctgaagcgcccgaggtc
gacgcgccgaaggccgacgcgtaa
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