Bradyrhizobium genosp. P: ACP2YO_01500
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Entry
ACP2YO_01500 CDS
T11254
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bgep Bradyrhizobium genosp. P
Brite
KEGG Orthology (KO) [BR:
bgep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgep03032
]
ACP2YO_01500
03400 DNA repair and recombination proteins [BR:
bgep03400
]
ACP2YO_01500
Enzymes [BR:
bgep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ACP2YO_01500
DNA replication proteins [BR:
bgep03032
]
Prokaryotic type
DNA Topoisomerases
ACP2YO_01500
DNA repair and recombination proteins [BR:
bgep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACP2YO_01500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
XRZ27871
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All DBs
Position
302977..304125
Genome browser
AA seq
382 aa
AA seq
DB search
MMDQQNIAAVRPVSADPAVALAKALGQWPKQPAKLKLDAPIKTSVEDIARDLGLRLGDQN
ELTIRRIKRGKSYSFVRANGSRIRDARTIRRLHSMAVPPAYRQVRYSSDPSTHLQAVGRD
AAGRLQYRYHADWEKVREQRKAHRLAKLVAALPKIRRKISAFLSGDEPTREFALSAAIEM
IARTAIRPGNESYARLNGTRGATTLLKSNVTLEDDSVVLTFKAKGGKAVRKECDAAKLVR
AIGILRAVPGKRMFQYHDRSGVVRAASTTAVNAFLREIAGIKISLKDFRTLMASAVVVES
LSRITPANSERGRKRQVLDAIRAAADQLSNTPAICRKSYVHDTIVTAFEDGILERFAATM
KGYRTQSKREQLLAQVVMAAGA
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcagcagaatatcgcggctgtgcggcccgtttccgccgatcctgctgtcgcc
ttggccaaggcgctgggccaatggcccaagcagccggcaaagctcaagctcgacgccccc
atcaagacctcggttgaagatatcgcccgcgatcttggcctgcggctcggcgaccagaac
gagctcaccatccgccgcatcaagcgcggcaagagctattcattcgttcgtgccaatggc
tcgcggatccgcgatgccaggacgatccgtcgcctgcactcgatggcggttccgccggcc
tatcgccaggtgcgctactccagcgatccgagcacgcatctgcaggcagtcggccgcgat
gccgccggccggctgcaataccgctaccatgccgactgggaaaaggtccgcgagcagcgc
aaggcgcaccgcctggccaagctcgtggctgcactgcccaagattcggcgtaagatctcg
gcgtttctgtccggcgatgagccgacgcgcgaattcgcgctgtcggccgcgatcgagatg
atcgcgcgcaccgcgatccgtcccggcaacgaatcctatgcccgcctcaacggcacccgc
ggcgccaccacgctgctgaagtccaacgtcacgctggaagacgacagcgtggtgctgacc
ttcaaggccaagggcggcaaggccgtccgcaaggaatgcgacgcggccaagctcgtccgc
gcgatcggtatcctgcgcgccgtgcccggcaagcgcatgttccagtaccacgaccgttcc
ggcgttgtccgtgccgcctcgaccacggcggtgaacgcgttcctgcgcgagatcgccggc
attaagatctcgctgaaggatttccgcaccctgatggcgtcagccgtcgtcgtcgagtcg
ctgtcgcggatcacgccggccaatagcgaacgtggccgcaagcgccaggtgctggacgcg
atccgcgccgcggccgatcagctttccaacacgccggcgatctgccgcaagagctacgtc
cacgacaccatcgtcaccgccttcgaagatggcatcctcgaacgcttcgctgcgacgatg
aagggttaccggacccagtccaagcgcgagcaattgctggcccaggtcgtgatggcggcg
ggggcgtaa
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