Bradyrhizobium genosp. P: ACP2YO_04440
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Entry
ACP2YO_04440 CDS
T11254
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bgep Bradyrhizobium genosp. P
Pathway
bgep03030
DNA replication
bgep03410
Base excision repair
bgep03420
Nucleotide excision repair
bgep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bgep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACP2YO_04440 (polA)
03410 Base excision repair
ACP2YO_04440 (polA)
03420 Nucleotide excision repair
ACP2YO_04440 (polA)
03440 Homologous recombination
ACP2YO_04440 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgep03032
]
ACP2YO_04440 (polA)
03400 DNA repair and recombination proteins [BR:
bgep03400
]
ACP2YO_04440 (polA)
Enzymes [BR:
bgep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACP2YO_04440 (polA)
DNA replication proteins [BR:
bgep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ACP2YO_04440 (polA)
DNA repair and recombination proteins [BR:
bgep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ACP2YO_04440 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACP2YO_04440 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
XRZ28397
LinkDB
All DBs
Position
complement(902455..905541)
Genome browser
AA seq
1028 aa
AA seq
DB search
MPKTASSAPAKSAPTTTTPVAAKAVAKGDHVFLVDGSGYIFRAYHALPPLNRKSDGLQVN
AVLGFCNMLWKLLRDMPADNRPTHLAIIFDKSEITFRNKLYPDYKAHRPPAPDDLIPQFA
LIREAVRAFDLPCLEQAGFEADDLIATYARLAGECGATTTIVSSDKDLMQLVTDKVVMYD
TMKDRRIGIPEVIEKFGVPPEKVVEVQALAGDSADNVPGVPGIGIKTAAQLIIEYGDLEQ
LLFRAGEIKQPKRREALLENAEKARISRQLVLLDDKVDLEVPLDDLAVHEPDARKLVAFL
KAMEFSTLTRRVADYSQIDPANVEADAGNKSGASSPLPLAGEADALGSVLARQSAAGGGL
SAEKAPTLPSPASGGGKERAKSADRQDKSSSRKGTPISLTEARAEAMRKLPFDRSKYQAI
GSLDALKAWVGRVGDVGHFAIEAISDSIDPMQAELSGIALALAPGDACYIPLGHKQAGGG
AGLFDAGLAPDQIKASDALAALKPLLESAGVLKIGFNVKFTAVLLAQHGITLCNTDDAQL
MSYALDAGRGSHALEQLAERSFGHAMVAYGNLIGSGKGKLTFDQVTIDKATEYSAESADA
TLRLWRILKPRLVADRMATVYETLERPLVSVLARMERRGISIDRQVLSRLSGDFAQTAAR
VEAEIQEIAGEPVNVGSPKQIGDILFGKMGLSGGTKTKTGAWSTTAQVLDDLAEQGHALP
SKILEWRQVSKLKSTYTDALPTYVHPQTHRVHTTYALAATTTGRLSSNEPNLQNIPVRTE
DGRKIRRAFIATSGHKLVSADYSQIELRLLAEIADVPVLRDAFRDGLDIHAMTASEMFGV
PIKDMPSEVRRRAKAINFGIIYGISAFGLANQLGIAREEASAYIKKYFERFPGIRAYMDD
TKEFCRRNGYVTTLFGRKMYYPEIKASNASHRAFNERAAINARLQGSAADIIRRAMIRME
DALAEKKLSAQMLLQVHDELIFEVPDNEVAATLPVVQKVMQDAPFPAVLLSLPLQVDARA
ANNWDEAH
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaacagcctccagtgcccccgccaaatccgctccgacgaccaccacgcctgtt
gccgccaaggccgtggcgaagggcgaccacgtcttcctggtcgatggctcgggctacatc
ttccgcgcctatcacgcgctgccgccgctgaaccgcaagtccgacggactgcaggtcaat
gctgtgctcggcttctgcaacatgctgtggaagctgctccgcgacatgccggcggacaac
cggccgacgcatctggccatcatattcgacaaatcggaaatcaccttccgcaacaagctc
tatcccgactacaaggcgcaccggccgccggcgcccgacgacctgatcccgcaattcgcg
ctgatccgcgaggcggtgcgcgctttcgacctgccctgcctcgaacaggcgggcttcgag
gccgacgatttgatcgcgacctatgcgcggctggccggcgagtgcggcgcgaccacgacg
atcgtgtcctcggacaaggatctgatgcagctcgtcaccgacaaggtcgtgatgtacgac
accatgaaggatcgccgcatcggcatcccggaggtgatcgagaagttcggcgtgccgccg
gagaaagtggtcgaggtgcaggcgctggccggcgactccgccgacaacgtgcccggcgtg
cccgggatcggcatcaagaccgcggcgcaactgatcatcgaatatggcgacctcgaacag
ctgctgttccgcgccggcgagatcaagcagccgaagcggcgcgaggcgctgctcgagaat
gccgagaaggcgcgcatctcaaggcaactggttttgctcgacgacaaggtcgatctcgaa
gtcccgctcgacgacctcgcggtgcacgagccggatgcacgcaagctggtcgccttcctc
aaggcgatggagttctccaccctcacccgccgcgtcgccgattattcgcagatcgacccg
gccaatgtcgaggctgatgcgggcaacaagagcggggcttcttcgcctctcccgcttgcg
ggggaggccgacgcgctcggcagcgttctcgcgcgccagagcgcggcgggtgggggtctc
tccgcggagaaagcccccaccctgccctcccccgcaagcgggggagggaaagaacgagcc
aaatcggccgaccgacaggacaaatcctcgagccgcaagggcacgccgatctcgctgacc
gaggcgcgcgcggaggccatgcgcaagctgccgttcgatcgcagcaaatatcaggcgatc
ggcagccttgacgccctgaaggcgtgggtcggccgcgtcggcgatgtcggccattttgcg
atcgaggcgatttcggactcgattgatccgatgcaggcggagctctccggcatcgctctg
gcgctggcccccggtgatgcctgctatatcccgctcggccacaagcaggccggcggcggc
gcgggcctgttcgatgcggggcttgctcccgaccagatcaaggcatcagacgcactcgct
gcgctgaaaccgctgctggaatcggcaggcgtcctgaagatcggcttcaacgtcaagttc
acagcggtgctgctggcgcagcacggcattacgctgtgcaacaccgatgatgcgcagctg
atgtcctatgcgctcgatgccggccgcggctcgcatgcgctggaacagcttgccgagcgc
tcgttcggtcacgccatggtcgcctatggcaatttgatcggcagcggcaagggcaagctc
accttcgatcaggtcacgatcgataaggcgaccgagtattcggccgagagcgcggacgca
acgttgcggctgtggcgcatcctcaagccgcggctggtcgccgaccgaatggcgaccgtc
tatgagacgctggagcggccgctggtctcggtgctggcgcggatggaacggcgcggcatt
tcgatcgaccgccaggtgttgtcgcggctgtcgggcgatttcgcccagaccgcggcgcgt
gtcgaggccgagatccaggagatcgccggcgagccggtcaatgtcggcagccccaaacaa
atcggcgacatcctgttcggcaagatgggtctctcgggcggcaccaagaccaagaccggc
gcgtggtcgaccaccgcgcaggtgctcgacgacctcgcggagcagggccacgcgctgccc
agcaagatcctggagtggcggcaggtctcgaagctgaaatcgacctacaccgatgcgctg
ccgacttacgtgcatccgcagacccatcgcgtccacaccacctacgcgctggcggcgacc
accacgggccggctgtcgtcgaacgaaccgaatttgcagaatatcccggttcgcaccgag
gacggccgcaagatccgccgcgccttcatcgcaacatcaggccacaagctggtgtccgcg
gactactctcaaatcgaattgcggctgctcgcagagatcgcggacgtgccggtgctgcgt
gacgcgttccgcgacgggctcgatattcacgccatgaccgcctccgaaatgttcggcgtg
ccgatcaaggacatgccgagcgaggtgcgccgccgcgccaaggcgatcaatttcggcatc
atctacggcatctcggcattcggcctcgccaaccagctcggcatcgcccgcgaggaagct
tcggcctacatcaagaaatacttcgagcgcttcccgggcattcgcgcctacatggatgac
accaaggagttctgccgcaggaacggctacgtcaccacgctgttcggccgcaaaatgtac
taccccgagatcaaggcgtcgaatgcgtcgcaccgcgccttcaacgaacgcgccgcgatc
aacgcgcggctgcagggctcggctgccgacatcatccgccgcgccatgatccggatggaa
gatgcgctcgccgagaagaaactctcggcgcagatgctgctgcaagtgcatgacgagctg
atcttcgaggtgcccgacaacgaggtcgcggcaacgctgccggtggtgcagaaggtgatg
caggacgcgccgttccccgcggtgctgctctcgctgccgctgcaggtcgatgcgcgggcg
gcgaacaattgggacgaagcgcattag
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