Bradyrhizobium genosp. P: ACP2YO_19180
Help
Entry
ACP2YO_19180 CDS
T11254
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bgep Bradyrhizobium genosp. P
Pathway
bgep03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bgep00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACP2YO_19180 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgep03021
]
ACP2YO_19180 (rpoC)
03400 DNA repair and recombination proteins [BR:
bgep03400
]
ACP2YO_19180 (rpoC)
Enzymes [BR:
bgep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACP2YO_19180 (rpoC)
Transcription machinery [BR:
bgep03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACP2YO_19180 (rpoC)
DNA repair and recombination proteins [BR:
bgep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACP2YO_19180 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
BSH_RND
Peptidase_M23
RPOC_hybrid
RnfC_N
ApbA_C
Motif
Other DBs
NCBI-ProteinID:
XRZ30953
LinkDB
All DBs
Position
3954990..3959192
Genome browser
AA seq
1400 aa
AA seq
DB search
MNQEIMNLFNPTTPAQVFDQIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGIICEKCSVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRIGLLLDMTLKDLERILYFEYYVVLEPGLTALKDRQLLSEDEYLKAQDEYGQDSFTA
MIGAEAIRELLKGLELEKLEAQLRADMAETDSDIKHKKLAKRLKIVEAFRFSGNKPEWMI
MTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG
PELRLHQCGLPKKMALELFKPFIYSRLDAKGLSTTVKQAKKLVEKERPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGQPIIVPSQDIVLGLYYVSIMREGLPGEGKIFGDMAELEHALH
SKVIHLHTKIKYRWEGMDETGKIGKRWIETTAGRVMLGNLLPKSPKISYDIINKLMTKRE
ISGVIDQVYRHCGQKETVIFCDRIMALGFYNAFKAGISFGKDDMVVPHSKWKIVDTTRTL
AKDFEQQYNDGLITHGEKYNKVVDAWSKATEEIAKAMMKEISATKRTASGAEAEVNSIYM
MAHSGARGSPAQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLSVLEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVAQDCIITQDDCGTKLGIKMRAIIDAGTVVASLGSRILGRTA
CEDLRDPATNNVVVKRDTLMEETHVDAIQQAGIQEVKIRSALTCELVNGICGKCYGRDLA
RGTPVNHGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLNEQSFVESNFDGKIVIRNKAI
ARNSEGQLVAMVRNMVVAIVDADGTERATHRIQYGSRMHVDEGDTVKRGQRIAEWDPYSR
PVLTEVEGAIGFEDLVEGQSISETLDESTGIAKRVVIDWRTTRGGADLRPAIVVKGKDGK
ILKLARGGDARYMLSVDGILSVDVGAKVKAGDILARISTESAKTRDITGGLPRVAELFEA
RKPKDAAIIAEIAGTIRFGRDYKNKRRISIEPMDKTEEPREYLIPKGKHIHLQDGDIVEK
GDFIVEGNPAPHDILAIKGIEELAAYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVEV
TDQGDTDLISGEQVDKIEFDALNVKAKEEGKKPATGTPVLLGITKASLQTRSFFSAASFQ
ETTRVLTEAAVNGKVDPLEGLKENVIVGRLIPAGTGASMARIREVAVKRDKLILDEREKQ
QTTIVPTAPEAEPLALPPAE
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagagattatgaatcttttcaatccgacgacgccggctcaggtcttcgaccag
atccggatttcgatcgcgtctccggagaagattctgtcctggtcctacggcgagatcaag
aagccggagaccatcaactaccgtaccttcaagcccgagcgtgacggcctgttctgcgcc
cgcatcttcgggccgatcaaggactacgagtgcttgtgcggcaagtacaagcggatgaag
tacaagggcatcatctgcgaaaagtgctcggtcgaggtgacgctgtcgcgcgtccggcgc
gagcgcatgggccatatcgaactggcggcacccgttgcccacatctggttcctgaagtcg
ctgccgtcgcgcatcggcctcctgctcgacatgacgctgaaggatctcgagcggatcctc
tactttgaatattacgtcgtgctcgagcccggcctgaccgcgctgaaggaccgccagctc
ttgtcggaagacgagtatctgaaggcgcaggacgagtatggccaggattccttcaccgcc
atgatcggcgcggaagcaatccgtgagctgctcaagggtctcgagctcgagaagctcgag
gcgcagctgcgcgccgacatggccgagaccgactcggacatcaagcacaagaagctcgcc
aagcgcctgaagatcgtcgaggccttccgcttctctggcaacaagccggagtggatgatc
atgaccgtcgtgccggtgattccgccggatctgcgcccgctggtgccgctcgacggcggc
cgcttcgcgacctccgacctcaacgacctctaccgccgcgtcatcaaccgcaacaaccgc
ctgaagcggctgatggaactgcgcgcgcccgacatcatcatccgcaacgaaaagcgcatg
ctgcaggaggcggtcgacgcgctattcgacaacggccgccgcggccgcgtcatcaccggc
gccaacaagcgtccgttgaagtcgctcgccgacatgctgaagggcaagcagggccggttc
cgccagaacctgctcggcaagcgcgtcgactattcgggccgttcggtgatcgtggtcggt
cccgagctgcgcctgcatcagtgcggtctgccgaagaagatggcgctcgagctgttcaag
ccgttcatctattcgcggctcgacgccaagggcctgtccaccacggtgaagcaggccaag
aaactggtcgagaaggagcggccggaggtctgggatatcctcgatgaggtgatccgcgag
catccggtgctgctgaaccgcgcgccgacgctgcatcgcctcggcatccaggcgttcgag
ccggtgctgatcgagggcaaggcgatccagctgcatccgctggtctgcgccgccttcaac
gccgacttcgacggcgaccagatggccgtgcacgttccgctgtcgctcgaggcgcagctg
gaagcgcgcgtcctgatgatgtcgaccaacaacatcctgcaccccgcgaacggccagccg
atcatcgtgccgtcgcaggacatcgtgctcggcctctactacgtctcgatcatgcgcgaa
ggcctgcccggcgagggcaagatcttcggcgacatggccgagctcgagcacgcgctgcac
tcgaaggtcatccacctccacaccaagatcaagtaccggtgggaaggcatggatgagacc
ggcaagatcggcaagcgctggatcgaaaccaccgcgggccgcgtcatgctcggcaatctg
ctgccgaagagcccgaagatctcgtacgacatcatcaacaagctgatgaccaagcgcgag
atctccggcgtcattgaccaggtctatcgtcactgcggccagaaggagacggtgatcttc
tgcgaccgcatcatggcgctcggcttctacaatgcgttcaaggccggcatctcgttcggc
aaggacgacatggtggtgccgcacagcaagtggaagatcgtcgacaccacccgtacgctg
gcgaaggatttcgagcagcagtacaatgacggcctgatcacccatggcgagaagtacaac
aaggtcgtcgacgcctggtcgaaggcgacggaagaaatcgccaaggcgatgatgaaggaa
atctccgcgaccaagaggacggcgagcggagcagaagccgaagtcaactcgatctacatg
atggcgcattccggtgcgcgtggttcgccggcgcagatgcgccagctcgccggcatgcgc
ggcctgatggccaagccgtcgggcgagatcatcgagacgccgatcatttccaacttcaag
gaaggtctgtcggtgctcgagtacttcaactcgacccacggcgcccgcaagggcctcgcg
gacaccgcgctgaagaccgcgaactcgggttacctgacgcggcgtctggtcgacgtggcg
caggactgcatcatcacgcaggacgactgcggcaccaagctcggcatcaagatgcgcgcc
atcatcgatgccggcaccgtcgtcgcctcgctcggctcgcgcatcctgggccgcacggcc
tgcgaagacctgcgcgatcccgccaccaacaacgtggtcgtcaagcgcgacacgctgatg
gaggagacccacgtcgatgcgatccagcaggccggcatccaggaggtcaagatccgttcg
gcactgacctgcgagctcgtcaacggcatctgcggcaagtgctacggccgcgatctcgcg
cgcggcacgccggtcaaccacggtgaggccgttggcgtcatcgcggcgcagtcgatcggt
gagcccggcacgcagctgacgatgcgcacgttccacatcggcggcgcggcgcagctcaac
gagcagtcgttcgtcgaatcgaacttcgacggcaagatcgtgatcaggaacaaggccatc
gcccgcaacagcgaaggccagctggtcgcgatggtgcgcaacatggtggttgcgatcgtc
gacgccgacggcaccgagcgcgcgacgcaccgtatccagtacggttcgcgcatgcacgtc
gacgagggcgacaccgtcaagcgtggccagcgcatcgcggagtgggatccctacagccgc
ccggtgctgaccgaagtcgagggcgcgatcgggttcgaggatctggtcgagggccagtcg
atctcggaaacgctcgacgagtccaccggtatcgccaagcgcgtggtcatcgactggcgc
acgacgcgcggcggtgcggacctgcgcccggccatcgtggtcaagggcaaggacggcaag
atcctgaagctcgcgcgtggcggcgatgcccgctacatgctgtcggtcgacggtattttg
tcggttgacgtcggtgcgaaggtgaaggccggcgacatcctggcgcgtatctccacggaa
agcgccaagacccgcgacatcaccggcggtctgccgcgggtggccgaactgttcgaggcc
cgcaagccgaaggacgcggcgatcatcgcggaaatcgctggcacgatccgcttcggccgc
gactacaagaacaagcgccgtatctcgatcgagccgatggacaagaccgaggagccgcgc
gagtacctgatcccgaagggcaagcacatccaccttcaggacggcgacatcgtcgaaaag
ggcgacttcatcgtcgaaggcaacccggcaccgcacgacatcctggcgatcaagggcatc
gaggaactcgctgcctatctggtcaacgaaatccaggaggtctaccggctgcagggcgtg
ctcatcaacgacaagcacatcgaggtgattgtccgtcagatgctgcagaaggtcgaggtc
accgaccagggcgacaccgacctgatctcgggcgagcaggtcgacaagatcgagttcgac
gcgctcaacgtcaaggccaaggaggagggcaagaagcccgccacggggacgccggttctg
ctcggcatcaccaaggcgagcttgcagacccgctccttcttctcggcggcgtcgttccag
gagaccacgcgcgtgctcaccgaagcggccgtcaacggcaaggtggacccgctcgaaggc
ctcaaggagaacgtcattgtcggccgcctgatcccggccggcaccggcgcctcgatggcg
cggatccgcgaagtcgcggtcaagcgcgacaagctgatcctcgacgagcgcgagaagcag
cagacgacgatcgtgccgacggcaccggaagcggagccgctggcgctgccgccggcggaa
tag
DBGET
integrated database retrieval system
