Bradyrhizobium genosp. P: ACP2YO_21940
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Entry
ACP2YO_21940 CDS
T11254
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bgep Bradyrhizobium genosp. P
Brite
KEGG Orthology (KO) [BR:
bgep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgep03032
]
ACP2YO_21940 (topA)
03400 DNA repair and recombination proteins [BR:
bgep03400
]
ACP2YO_21940 (topA)
Enzymes [BR:
bgep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ACP2YO_21940 (topA)
DNA replication proteins [BR:
bgep03032
]
Prokaryotic type
DNA Topoisomerases
ACP2YO_21940 (topA)
DNA repair and recombination proteins [BR:
bgep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACP2YO_21940 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Milton
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
XRZ31415
LinkDB
All DBs
Position
complement(4551806..4554562)
Genome browser
AA seq
918 aa
AA seq
DB search
MNIVIVESPAKAKTINKYLGASYEVLASFGHVRDLPAKNGSVDPDANFQMIWEIDDKAAG
RLNDIAKALKGADRLILATDPDREGEAISWHVLEVMKEKRALKDQKVERVVFNAITKQAV
TDAMKAPRQIDGALVDAYMARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
ELEIEKFVPREYWSLVATLLTPRGDVFEARLVGADGKKIQRLDIGTGAEAEDLKKAIEAA
LFKIATVEAKPARRNPQAPFTTSTLQQEASRKLGFAPAHTMRVAQRLYEGIDIGGETTGL
ITYMRTDGVQIDPSAITQARKVIGEDYGNAYVPDAPRQYQAKAKNAQEAHEAIRPTDLSR
RPASIGRRLDADQARLYELIWKRTIASQMESAELERTTVDIEAKAGSRTLELRASGQVIK
FDGFLALYQESRDDEEDEDSRRLPAMSEGETVKRQSLAVTQHFTEPPPRFSEASLVKRME
ELGIGRPSTYASILQVLKDRGYVKLEKKRLHGEDKGRVVVAFLENFFSRYVEYDFTADLE
EQLDRVSNNEIAWQQVLKDFWTGFIGAVNDIKDLRVSEVLDALDAMLGPHIYPPRADGGD
IRQCPTCGTGRLNLKAGKFGAFVGCSNYPECRYTRPLAADNAESADRILGKDPDTGFDVV
VKAGRFGPYIQLGEQKDYAEGEKPKRAGIPKGTSPGDVDLELALKLLSLPREIGKHPETG
EPIIAGLGRFGPFVKHEKTYASLEAGDEVFDIGLNRAVTLIAEKVAKGPSGRRFGADPGK
PLGDHPSLGAVALKNGRYGAYVTAGGVNATIPSDKTPDEMTLADAIALIDERAAKGGGKK
VKKAKAAKPAKAAAAKADGDAGAKPAKKAAAKKAAAKPKSDAVSKARAPVPSAAKTSAAK
PAAPTKAPAKKSAGKARG
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgtcattgtggagtcgccggccaaggccaagacgatcaacaaatatctgggc
gcctcctacgaggtgctggcgtcgttcggccatgttcgcgacctcccggccaagaacgga
tcggtcgatccggacgccaattttcagatgatttgggagatcgacgacaaggccgccggc
cggctcaacgacatcgcgaaggcgctgaagggcgccgaccgtctgattctcgcaaccgac
cccgatcgcgagggcgaggcgatctcctggcatgtgctggaggtgatgaaggagaagcgc
gcgctgaaggaccagaaggtcgagcgcgtggtgttcaacgccatcaccaagcaagcggtc
acggacgccatgaaggcgccgcgccagatcgacggtgcgctggtcgacgcctatatggcg
cgccgcgcgctggactatctggtcggcttcacgctgtcccccgtgctgtggcgcaagctg
cccggcgcgcgctcggccggccgcgtgcagtcggtcgcgctgcggctggtctgcgaccgc
gagctggagatcgagaagttcgtcccccgcgaatactggtcgctggttgccaccctgctg
acgccgcgcggcgacgtgtttgaggcgcgtctcgtcggcgccgacggcaagaagattcag
cggctcgacatcggcaccggcgcggaagccgaggatctcaaaaaggcgatcgaggccgcc
ctcttcaagatcgcgaccgtcgaggccaagccggcgcggcgcaatccgcaagcgccattc
accacctcgacgctgcagcaggaagccagccgcaagctcggcttcgcaccggcgcacacc
atgcgcgtcgcgcagcgtctttatgagggcatcgatatcggcggcgagaccaccggtctc
atcacctatatgcgaaccgacggcgtgcagatcgatccgtcggccatcacccaggcgcgc
aaggtgatcggcgaggattacggcaacgcctatgtgccggatgcgccgcgccagtaccag
gccaaggccaagaacgcccaggaagcgcacgaagcgatccgcccgaccgatctgtcgcgc
cggcccgcttcgatcggccgccggctcgatgccgaccaggcgcggctgtatgagctgatc
tggaagcgcaccatcgcaagccagatggaatcggcggagctcgagcgcaccaccgtcgat
atcgaggccaaggcaggctcccgcacactggagctgcgcgcctcgggtcaggtcatcaag
ttcgacggcttcctcgcgctctatcaagagagccgcgacgacgaggaggacgaggattca
cgccgcctgcccgcgatgagcgaaggcgaaaccgtgaagcgccagagcctcgccgtcacc
cagcatttcactgagccgccgccgcgcttctcggaagcctcgctggtgaagcggatggaa
gagctcggcatcggccgtccctcgacctacgcctcgatcctgcaggtcctgaaggaccgc
ggctacgtcaagctggagaagaagcggctgcatggcgaggacaagggccgcgtcgtggtc
gcgttcctggagaacttcttttcgcgctatgtcgagtatgacttcaccgccgatctcgag
gagcagctcgaccgcgtctccaacaacgagattgcctggcagcaggtgctgaaggatttc
tggaccggcttcatcggtgccgtgaacgacatcaaggacctcagggtctccgaagtgctt
gacgcgctcgacgcgatgctgggtccgcacatctatccgccgcgcgcggatggcggcgat
atcaggcagtgcccgacctgcggcaccggccggctcaatttgaaggccggcaagttcggc
gccttcgtcggctgctcgaactatccggaatgccgttacacccgtccgctcgccgccgac
aacgccgagagcgccgaccgcatcctcggcaaggatcccgacaccgggttcgatgtcgtg
gtcaaggccggccgcttcggtccttacatccagctcggcgagcagaaggattacgcagag
ggcgagaagccgaagcgcgcgggcattccgaagggcacctcgcccggcgatgtcgacctc
gagcttgcgctcaagctgttgtcgctgccgcgcgagatcggcaagcacccggagaccggc
gagccgatcatcgcgggcctcggccgcttcgggccgttcgtcaagcatgagaagacctat
gccagcctcgaggccggcgacgaggtgttcgacatcgggctgaaccgcgcggtgacgctg
atcgcggagaaggtggccaaggggccgagcggccgccgcttcggtgccgatcccggcaag
ccgctcggcgatcacccctcgctcggcgcggtcgcgctgaagaacggccgctacggcgct
tacgtcaccgctggaggcgtcaatgcgacgatcccgagcgacaagacgcccgacgagatg
acacttgccgacgcgatcgcgctgatcgacgagcgcgctgccaagggcggcggcaagaag
gtcaagaaggcgaaagccgcgaagccggcgaaagccgctgctgcaaaggctgatggcgac
gccggggccaagcccgccaagaaggccgcggcgaagaaagccgccgcaaagccgaaatcg
gacgcggtcagcaaagcgcgcgcgccggtcccgtcagccgccaagacctcagccgcgaag
cctgcggcaccaaccaaagcacccgcgaagaagagcgccggcaaggcaagaggataa
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