Burkholderia sp. CCGE1003: BC1003_0093
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Entry
BC1003_0093 CDS
T01314
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
bgf
Burkholderia sp. CCGE1003
Pathway
bgf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bgf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BC1003_0093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgf03400
]
BC1003_0093
Enzymes [BR:
bgf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
BC1003_0093
DNA repair and recombination proteins [BR:
bgf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BC1003_0093
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ADN56098
UniProt:
E1T4N4
LinkDB
All DBs
Position
1:104959..105738
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AA seq
259 aa
AA seq
DB search
MLRVITANLNGIRSAAKKGFFDWFGEQNADVLCVQEIKCSQDDMTPEFMAPHDFTGYFQH
AVKKGYSGAGVYTRHEPDEVVIGFGSEEFDPEGRYVELRFGKLSIVSVYVPSGSSGEERQ
QAKYRFMDEFMPHLAGLAREREVIVCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLTK
LFDEVGYVDVFRTLDQRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIAGKAKRTEVFRD
IKFSDHAPLTVDYDHDVKK
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgtgtgattaccgctaacctgaacggcatccgctcagcggcaaagaaaggtttt
ttcgactggttcggcgagcagaacgccgacgtcctgtgcgtgcaggaaatcaaatgttcg
caagacgacatgactccggaattcatggcgccgcacgacttcaccggctatttccagcac
gcggtgaagaaaggctatagcggcgccggtgtctatacgcggcacgagccggacgaggtg
gtgatcggcttcggcagcgaggagttcgaccccgaagggcgctatgtcgaactgcgcttt
ggcaagctgtcgattgtgtctgtctacgtgccgtcggggtcgagcggcgaggaacgccag
caggccaaatatcgtttcatggacgagttcatgccacatctggcgggactcgcgcgcgaa
cgcgaggtgatcgtgtgcggcgacgtcaatatcgtccacaaggaaatcgacatcaagaac
tggaagagcaaccagaagaactcaggctgtctgcctgaagagcgcgcgtggctcactaaa
cttttcgatgaagtgggttacgtcgacgtattccgcacgctcgatcagcggccggagcaa
tacacgtggtggagcaatcgcggccaggcgtacgcgaagaacgtagggtggcgtatcgat
tatcagattgcaacgcctggcatcgccggcaaggccaaacgcaccgaggtatttcgtgac
atcaagttcagcgaccacgcgccgctcaccgtcgactacgaccacgacgtgaagaagtga
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