Burkholderia sp. CCGE1003: BC1003_0322
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Entry
BC1003_0322 CDS
T01314
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
bgf
Burkholderia sp. CCGE1003
Pathway
bgf02020
Two-component system
bgf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bgf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BC1003_0322
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BC1003_0322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgf03021
]
BC1003_0322
Transcription machinery [BR:
bgf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BC1003_0322
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_38
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ADN56326
UniProt:
E1T6J3
LinkDB
All DBs
Position
1:complement(351022..352539)
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AA seq
505 aa
AA seq
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MKASLQLRLSQHLALTPQLQQSIRLLQLSTLELQQEVATAISQNPLLENEDDWIASPLRV
AADGSLIAQAPGSAAPPDQMGGNGSSSSSSSSERSESGEPQSVDEYNGLAGDGNGDASQW
NLDDYGRSGNASDDDDLPPLQIHESSTSLRDHLMAQLRVTQAGQRDRALVTFLIESLDDD
GYLAATLEEVLADLPQELEVDLDELNAALALLHSFDPAGVGARSASECLKLQLLRLEPTP
TRALALDIVAHYLELLAARDFTRLRKHLKASDDDLRAAHALIRSLEPFPGAAYGKAEADY
VVPDIMVRKTAQGWQAELNPEVVPKLRINHLYANILRNNRGDPGSGSLRQQLQEARWLIK
NIQQRFETILRVAQAIVERQKSFFVHGEIAMRPLVLREIADTLGLHESTVSRVTTGKYML
TPFGTLEFKYFFGSHVSTDTGGAASSTAIRALIKQLIGAENAKTPLSDSRIAELLAEQGF
VVARRTVAKYREALRIPAVNLRKSL
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccagcctccaactccgcctatcgcagcatcttgcgttgaccccgcaactgcag
cagtccatccggctgcttcagctgtccacgctcgaactgcagcaggaagtggcaacggcg
atctcgcagaatccgctgctcgaaaacgaggacgactggattgcgagcccgcttcgcgtg
gccgccgacggctctctgatcgcgcaggcacccggttcggccgcgccgcccgaccagatg
ggcggcaacggctcgtcgtcgtcctctagcagcagcgagcgctcggagagcggcgagccg
caaagcgtggacgagtacaacggcctcgcgggcgacggcaacggcgacgcgtcacagtgg
aacctcgacgactacggccgctccggcaacgcctccgacgacgacgacctgccgccgctg
caaattcacgaatcgagtacttcgctgcgcgatcacctgatggcgcaattgcgcgtgact
caggccggtcagcgcgaccgcgcgctggtcacctttctgatcgaatcgctcgacgacgac
ggctaccttgccgccacgctcgaagaagtgcttgccgacctcccgcaagagctcgaagta
gatctcgacgaactgaacgcggcactcgcgctgctgcacagcttcgacccggcgggcgta
ggcgcgcgctcggcgtccgaatgcctgaagctgcaattgctgcggctcgagccaacgccc
acgcgggcgttggcgctcgacatcgttgcccattatctggaactgctggccgcgcgcgat
ttcacgcggctgcgcaagcatttgaaagccagcgacgacgacctgcgcgccgcgcacgca
ctgatccgctcactggagccgtttccgggcgccgcatacggcaaggccgaggcggactac
gtggtgcctgacatcatggtgcgcaaaaccgcccagggctggcaggccgaactgaatccc
gaggtcgtgccgaagctgcgcatcaaccacctgtacgccaacattctgcgcaataaccgg
ggcgatccgggcagcggttcgttgcgccagcaactgcaagaggcgcgctggctgatcaag
aatatccagcagcgtttcgaaacaatcctgcgggtcgcgcaggccattgtcgagcgtcaa
aagagcttttttgtgcacggcgaaattgccatgcgccccttggttttgcgggaaattgct
gatacgctgggcctacacgagtcaactgtctcgcgtgtgacaaccggtaagtacatgctc
accccgttcgggacgcttgagttcaaatacttcttcggttcgcatgtttcgacggatacg
ggcggcgcggcgtcttcaacggccattcgcgcgctcatcaagcaactgataggagcggaa
aacgcaaaaacgcctctctcagacagccgcatagccgaactgctggcggaacagggcttc
gtggtcgcacggcgcaccgtggcgaaatatcgcgaagcgctcagaatcccggcagtcaac
ctgcgcaagtctctgtag
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