Burkholderia sp. CCGE1003: BC1003_1268
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Entry
BC1003_1268 CDS
T01314
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
bgf
Burkholderia sp. CCGE1003
Brite
KEGG Orthology (KO) [BR:
bgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgf03400
]
BC1003_1268
DNA repair and recombination proteins [BR:
bgf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BC1003_1268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DUF7125
DnaB_C
AAA_16
AAA_22
GvpD_P-loop
ChlI
AAA_24
SLFN-g3_helicase
Lon_C
RecA_N
nSTAND3
nSTAND_NTPase5
AAA_14
AAA_5
MCM
NACHT
GvpD_bR2
PAXNEB
DZR
DUF7129
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ADN57245
UniProt:
E1T4T9
LinkDB
All DBs
Position
1:1461432..1462808
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AA seq
458 aa
AA seq
DB search
MAKAKTVYVCSECGAQSPKWAGQCPSCQAWNTLVESVAEAPSAHRFQSLAKSAPVRRLAD
IEASDVPRFSTGVGEFDRVLGGGLVPGGVVLIGGDPGIGKSTLLLQSLAEIAADRRALYI
SGEESAAQIALRAQRLSLLEPGSKASELKLLAEIQLEKIQATIADERPDVAVIDSIQTVY
SDALTSAPGSVAQVRECAAQLTRIAKQSGVTIIMVGHVTKEGALAGPRVLEHIVDTVLYF
EGDTHSSFRLVRAIKNRFGAVNELGVFAMTERGLRGVANPSALFLSQHEQSVPGSCVLVT
QEGTRPLLVEVQALVDSANAPNPRRLAVGLEQNRLAMLLAVLHRHAGIACFDQDVFLNAV
GGVKITEPAADLAVLLAIHSSMRNKPLPKGLVVFGEVGLAGEIRPSPRGQERLKEAAKLG
FSVAVIPKANAPKQPIEGLQVVAVERLEQAIDRVRTLD
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaagcaaaaacggtgtacgtatgcagtgaatgcggcgcgcagtcgccgaaatgg
gcagggcagtgtccgtcgtgtcaggcctggaacacgctggtggagtcggtggccgaggcg
ccgtccgcgcatcgcttccagtcgctcgcgaaaagcgcacccgtgcggcgtctcgccgat
atcgaagcgtccgacgtgccacgcttttccacgggcgtcggcgaattcgaccgcgtgctt
ggcggcggcctcgtgccgggcggcgtggtgctgatcggcggcgacccgggcatcggcaaa
tccacgctgttgctgcagtcgctcgccgaaatcgccgccgacaggcgtgcgctgtacatc
agcggcgaggaatcggccgcccagatcgcgttgcgcgcgcaacgcttgtcgctgctcgaa
ccaggttcgaaagcgagcgagctcaaattgctcgccgaaatccagctcgaaaaaattcag
gcgacgattgccgacgaacggcctgacgtcgccgtcatcgactccattcaaaccgtctat
tcggatgcgctgacgtcggcgccgggctcggtcgcccaggttcgcgaatgcgcggcgcaa
ctcacgcgtatcgcgaagcagtcgggcgtcacgatcatcatggtcggccacgtgacgaaa
gagggcgcgctcgccgggccgcgcgtgctcgagcatatcgtcgacacggtgctgtacttc
gagggcgacacgcattcgtcgtttcgcctcgttcgcgcgatcaagaaccgcttcggcgcg
gtcaacgaactgggcgtgttcgcgatgaccgagcgcggcttacgcggcgtcgccaatccg
tcggcgctctttttgtcgcagcacgagcagtcggtgccgggctcgtgcgtgctggtgacg
caggagggcacacggccgctgctcgtcgaagtgcaggcgctggtcgactccgcgaacgcg
ccgaatccgcggcgtcttgccgtcggcctcgagcagaaccgtcttgcgatgctgcttgcg
gtgctgcaccggcatgcgggcattgcctgtttcgatcaggatgtgtttctcaacgcggtg
ggcggcgtcaagatcacagagccggccgcggacctggcggtgttgctcgcgattcattcg
tccatgcgcaacaagccgctgcccaaaggactcgtggtgttcggcgaagtggggctcgcc
ggcgagatccggccgtcgccgcgcgggcaggagcgtctgaaggaagccgccaagcttggt
ttttcggttgccgtcatcccgaaggcaaacgcgcccaagcagccgatagaaggcttacag
gtggttgcggtcgagcgcctcgaacaggctatcgaccgggtccgcacgctcgactag
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