Burkholderia sp. CCGE1003: BC1003_1996
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Entry
BC1003_1996 CDS
T01314
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bgf
Burkholderia sp. CCGE1003
Brite
KEGG Orthology (KO) [BR:
bgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bgf03016
]
BC1003_1996
Enzymes [BR:
bgf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BC1003_1996
Transfer RNA biogenesis [BR:
bgf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BC1003_1996
Prokaryotic type
BC1003_1996
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ADN57959
UniProt:
E1TAL6
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All DBs
Position
1:complement(2306214..2307152)
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AA seq
312 aa
AA seq
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MTAPERPRVPRRALDGVLLLDKPLGLSSNDALIRAKRLYLAKKAGHTGTLDPLATGLLPL
CFGEATKFSQDLLEADKTYEATMRLGIRTTTGDAEGEPVDTRAVACDEAAVRAVLPAFLG
DIVQVPPMYSALKRDGKPLYEYARAGQTVERQGREVTIHSLTLLACALPDVTFRVTCSKG
TYVRTLAEDIGEALGCGAHLVALRRTGVGALTLEHAVTLDALSDATSSERDAWLQPVDAL
LSTFPSVQLDEDATRRFLHGQRLKLSELELSAEAMSASRVRVYAAAQGRLLGVARSGEGV
LAPERLVVTATD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcacctgaacgcccccgcgtgccgcgccgcgcgctcgacggcgtgctgctgctc
gacaagccgctcggcctgtcgagcaacgacgcattgattcgcgcgaagcgcctgtatctg
gcaaaaaaggcgggccacaccggcacgctggatccgctcgccaccggcctgctgccgctc
tgtttcggcgaagccaccaagttctcgcaagatctgctcgaagccgacaagacgtacgag
gccacgatgcgcctcggcattcgcacgaccacgggcgacgccgagggcgagccggtcgac
acgcgcgcggtcgcttgcgacgaagccgcggttcgcgccgtgctgccggcctttctcggc
gacatcgtgcaggttccgccgatgtattccgcgctcaaacgcgacggcaagccgctctac
gaatatgcgcgcgcgggccagaccgtcgagcggcaagggcgcgaggtcactatccattcg
ctgacgctgcttgcttgcgcgctgccggatgtcacatttcgcgtcacctgcagcaagggg
acgtatgtgcgcacgctcgccgaagatattggcgaggcgttgggctgcggcgcccacctg
gtggctttgcggcgcaccggcgtgggcgcgttgacactcgagcatgcggtgacgctcgat
gcgctctcagacgcgaccagcagcgagcgcgacgcatggctgcaaccggtggacgcactg
ctgtcgacgttcccgtccgtgcagctcgacgaagacgcgacgcgccgctttctgcacggt
cagcgcctgaagttatcggaactcgaattgagcgctgaagcgatgagcgcgtcgcgcgtg
cgtgtgtacgcggcggcgcagggccgcctgctcggcgtggccaggagcggcgaaggtgtg
ttggcgccggagcggctggtcgtcacggcaacggattag
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