Burkholderia sp. CCGE1003: BC1003_2083
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Entry
BC1003_2083 CDS
T01314
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
bgf
Burkholderia sp. CCGE1003
Pathway
bgf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bgf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BC1003_2083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgf03400
]
BC1003_2083
DNA repair and recombination proteins [BR:
bgf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BC1003_2083
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BC1003_2083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_16
nSTAND1
AAA_21
DnaJ_CXXCXGXG
AAA_29
SMC_N
RsgA_GTPase
DUF4350
DUF7439
Motif
Other DBs
NCBI-ProteinID:
ADN58044
UniProt:
E1TBP6
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All DBs
Position
1:complement(2411792..2414503)
Genome browser
AA seq
903 aa
AA seq
DB search
MDALHNKARPRALPSEESAFTGFVQVRGAREHNLKNVDVQIPRDALVVFTGVSGSGKSSL
AFGTLYAEAQRRYFESVAPYARRLIDQVGVPEVDAIEGLPPAVALQQQRGAPSARSSVGS
VTTLSSLVRMLYSRTGDYPPKQPMLFAEDFSPNTVQGACPTCHGLGRVYEVTEQSMVPDD
SRTIRERAIAAWPPAWHGQNLRDILVTLGYDVDKPWRDLPKKDRDWILFTDEQPTVPVYA
GLTPKETRAALKRKDEPSYQGTFTGARRYVLHTFANTQSALMKKRVSQFMVGSVCPSCHG
KRLKKEALSVTFAGLDIGAFSQLSLAELAELLKPIARGEWPEPDAADAGKGAAKGTGNGT
AKGSVLSRSEMRDAVDKRVAAGGSAHKASPDVRRTPNLSTEKRVAAQRIAAELLERLTTL
IDLGLGYLSLERSTPTLSSGELQRLRLATQLASQLFGVVYVLDEPSAGLHPADGEALFSA
LNRLKAAGNSLFVVEHDLQMMRRADWLIDVGPAAGEAGGHVVYSGPPAGLANVQASQTGA
YLFAPPEPAARVPREPAGWLRLVGITRNNLHELDAAFPLGCLTAVTGVSGSGKSSLVSHA
LTELVASHLGRALDNPDDDEQDPLLAGPSTPTGGRITEGMDALRRLVRVDQKPIGRTPRS
NLATYTGLFDHVRKLFADTPLARKRRYGASRFSFNVSQGRCPTCEGEGFVSVELLFLPSV
YAPCSTCQGTRYNPQTLEVTWRDKNIAEVLGMTVGAACDFFADEPSVMRALNVLRDIGLG
YLRLGQPATELSGGEAQRIKLATELQRAQRGDTLYILDEPTTGLHPADVDRLMLQLQGLV
DAGNTVVLVEHDMRVAAQSDWVIDVGPHAGEAGGKIVASGTPEEVARAKESRTAEYLRQY
LVA
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggatgcacttcacaacaaagcccgcccgagggcgctgccatccgaagaatcggccttc
accggctttgtgcaggtgcgtggcgcgcgcgaacataatctgaagaacgtcgatgtgcag
attccgcgcgatgcgctggttgtcttcaccggcgtgtcggggtcgggcaaatcgtcgctc
gcattcggcacgctgtatgccgaggcgcagcggcgctatttcgagtcggtcgcgccgtat
gccaggcgtctgatcgaccaggtcggcgtgcccgaagtggacgccattgaaggcctgccg
cccgcggtcgcgttgcagcagcagcgcggcgcgccgagcgcgcgttcgtcggttggcagc
gtgactacgctgtcgagccttgtgcgcatgctttattcgcgcaccggcgactatccgccg
aagcagcccatgttgtttgccgaggatttctcgccgaacaccgtgcagggcgcctgtccg
acttgccacgggcttggccgcgtgtacgaggtcaccgaacaatcgatggtgccggacgac
tcgcgaaccattcgcgagcgcgcaatcgctgcatggccgcccgcgtggcacggacagaat
ctgcgcgacattctggtgacccttggctacgacgtcgacaagccgtggcgcgacttgccg
aagaaagaccgcgactggattctcttcaccgacgaacagccgaccgtccctgtgtacgcc
ggcctcacgccaaaggaaacgcgcgccgcgctcaaacgcaaggacgagccgagctatcaa
ggcaccttcaccggcgcgcgccgctacgtgctgcacacgttcgcgaacactcagagcgcg
ctgatgaaaaaacgcgtgtcgcaattcatggtcggcagcgtgtgtccgagttgtcacggt
aagcggctgaagaaagaagcgctgtcggtgacatttgccgggctcgacatcggcgcgttc
tcgcagttgtcgcttgccgaactggccgagctgctcaaaccgattgcgcgcggtgaatgg
cctgagccagatgcagcagatgcgggcaaaggcgcggccaaaggcacgggcaatggcacg
gccaaaggcagcgtgctcagcagaagcgagatgcgcgacgccgtcgacaaacgggtcgcc
gcaggcggttccgcgcataaagcctcgcccgacgtgcgccgcacaccgaacctttccaca
gaaaaacgcgttgccgcgcaacgcattgcagcggagttgctcgaacgtctgacgacgctt
atcgatctggggctgggctatctttcgctggagcgcagtacgcccacgctgtcatccgga
gaactgcaacgcctacggctcgccacgcagttggcgtcgcagttgttcggcgtcgtgtat
gtgctcgacgagccatcggccgggctgcatcctgccgatggcgaagcgttgttcagcgcg
ctcaatcgcctgaaggcggcgggcaattcgttgtttgtcgtcgaacatgatctgcagatg
atgcggcgcgccgactggctcatcgacgtcggtccggcggccggcgaggccggcggtcac
gtggtctatagcgggccgcccgccggcctcgcgaatgttcaggcgtcacaaacaggcgcg
tatctgtttgcaccgcccgagcccgccgcacgcgtgccgcgcgaacccgccggctggctg
cggctcgtcggcatcacgcgcaataacctgcatgaacttgacgcggcgtttccgctcggc
tgcctgactgccgtcacgggcgtgtcgggctcgggcaagtcgagcctcgtgagccacgcg
ttgacggaactggtggcaagccaccttggacgcgccctcgacaacccggacgacgacgag
caggacccattgcttgccggtccgagcacgccgaccggcggccgcattacggaaggcatg
gacgcgctgcgccgcctcgtgcgcgtcgatcagaaacccatcggccgcacgccacgctcc
aacctcgccacctatacgggcctgttcgaccacgtgcgcaagctgtttgccgacacgccg
cttgcccgcaagcgacgctacggcgcaagccgcttctcgttcaacgtgtcgcaaggccgt
tgcccaacgtgcgagggcgaaggcttcgtcagcgtcgaactgctgttcctgccgagtgtc
tatgcgccttgctcgacgtgccagggcacgcgctacaacccgcagacgctcgaagtcacc
tggcgcgacaagaacatcgccgaggtgcttggcatgaccgtgggcgccgcctgcgatttc
ttcgccgacgagcccagcgtgatgcgcgcgctgaacgtgctgcgcgacatcggcctaggc
tatttgcggctcggtcagccggccacggaattgtccggtggcgaagcgcaacgcatcaag
ctcgctaccgaactgcaacgcgcgcagcgcggcgacacgctgtatatcctcgacgagccg
accacgggcctccatcccgccgacgtcgaccggctcatgttgcaactgcaggggctcgtc
gacgccggcaatacggtggtgctggtcgaacacgacatgcgggtggcggcgcagagcgac
tgggtgatcgacgtcggcccgcacgccggcgaagctggcgggaagatcgtggcgagcggc
acgcccgaagaagttgcgcgcgcgaaggaaagccgcaccgccgagtatctgcggcaatac
ctcgtagcctga
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