Burkholderia sp. CCGE1003: BC1003_2101
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Entry
BC1003_2101 CDS
T01314
Name
(GenBank) GAF modulated sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
bgf
Burkholderia sp. CCGE1003
Brite
KEGG Orthology (KO) [BR:
bgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bgf03000
]
BC1003_2101
Transcription factors [BR:
bgf03000
]
Prokaryotic type
Helix-turn-helix
Other families
BC1003_2101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
GAF
AAA_5
PAS_4
Mg_chelatase
HTH_23
HTH_7
AAA_2
AAA_16
AAA
HTH_28
HTH_50
HTH_30
HTH_AraC
nSTAND6
PAS
Motif
Other DBs
NCBI-ProteinID:
ADN58062
UniProt:
E1TBR4
LinkDB
All DBs
Position
1:complement(2435503..2437503)
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AA seq
666 aa
AA seq
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MDQLQRQHIETVLLTTTSGSAAGARAHDAIIQTSWRRCVHQYGLDPARMQEARILPQFRL
REHQQRIDDFTRIARHGLDTLYSQVGGMGYVVLLTDADGVTVDFRGDANTDAALRRAGLY
LGAEWSENGAGTCAVGTALATGQALTVHQDDHFDATHIPLTCTAAPLFDSYGQLNAILDI
SALCSPQAKYSQMLALQLVRMYANRIEDANFLRRHRQDWMLKLSPAPEFLDVNPEYLIAL
DAGGRISGHNRRAQQMLIAEPGVETMGQSLLGMRFDELFDARAEDLGRFVYSRPSEQRVL
RLSRSGKRLYLSVMPPVLRLHHPMQDDVAPPLPAELAALCGGDAALQQQLQRAARLIDSP
INLLINGETGSGKEFLAKALHRASSRRNGPFIAVNCAAIPEALIESELFGHLPNSFSGAG
SKPKRGLIEEANGGTLFLDEIGDMPRELQSRLLRVLSEGEVLAIGASRPVPVDVRVISAT
HHPLDQLISTGRFREDLYYRLNGARLVLPPLRERSDLDWLVQKLLAVPEAGSGFTISEAA
RARLHRHRWPGNLRELRNALEYARAVCSHKHIEADDLPEGIGDTAKETVAEPACSDPAAH
PAHVSQGNTLPPEGIVLMQHLRASGWNLSAVAREIGISRMTLYRRMARYGIQSPNRSDAK
AGDISR
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggaccagttgcaacgccagcacatcgaaacagtcctcctgacgaccaccagtggatcg
gcggcaggcgcacgcgcgcacgatgcgatcatccagacttcgtggcggcgttgcgtgcac
cagtacggtcttgatcctgcccgcatgcaggaggcacgcatcctgccgcagttccgcttg
cgcgaacatcagcaacgtatcgacgatttcacgcggatcgcccgtcacggcctcgacacc
ttgtacagccaggtgggaggaatgggctacgtggtcctgctgaccgatgccgacggcgtc
actgtcgactttcgcggcgatgccaatacggacgcagcgctgcgccgcgccggcctctat
ctgggcgccgaatggagtgagaacggcgcgggcacctgtgcggtgggtactgcgctcgcg
acgggccaggctttgacagtgcatcaggacgaccatttcgatgcgacgcacattccattg
acctgcaccgctgcgccgctgttcgattcgtatggccagctcaacgcgattctcgacatc
tccgcactgtgttcaccgcaggccaaatacagtcagatgcttgcgttgcaactggtgcgc
atgtacgcgaaccgcatcgaggacgccaatttcctgcgccggcaccggcaggactggatg
ctcaagctcagtccggctcccgagttcctcgatgtcaatccggagtatctgatcgcgctc
gacgccggcggccggatctccggccataaccgccgtgcgcagcaaatgctgatagccgag
ccgggcgtcgagaccatgggccagtctctgctcggcatgcgattcgacgagctgtttgat
gcacgcgctgaagacctgggccgctttgtttattcgcggcccagcgagcagcgcgtgctg
cggttaagccgtagcgggaaacggctgtatttgagcgtgatgccgcccgtgctgcgcttg
catcatccgatgcaggacgacgtagcgccgccgttgccagccgagctggccgcgctatgc
ggtggtgacgccgcactacagcagcagttgcaacgtgctgccaggctgatcgattcgccg
atcaatctactgatcaacggcgagaccggtagcggcaaggaatttctggccaaggcactg
catcgagccagctcacgtcgcaatggcccgttcatcgcggtcaactgcgcggcgatccct
gaagcgctgatcgagagcgaattgttcggacatctgcccaacagcttctcgggcgccggt
tcgaaaccgaagcgcggcctgatcgaggaggccaacggcggcacgctatttctcgacgag
attggcgacatgccgcgcgagctgcagtcgcgtctgctccgcgtgctgtccgaaggcgag
gtgctggcgatcggcgcttcgcgtcccgtgcctgtcgacgtgcgggtgatttcggccacc
caccatccgctcgaccagttgatcagcaccgggcggtttcgcgaggacctgtactaccgt
ctcaacggcgcgcgcctcgtactgccgccgctgcgcgagcgcagcgatctggactggctg
gtgcagaagctgctcgccgtgccggaggcagggtccggcttcacgatttcggaagcggcg
cgtgcgcggttgcatcggcaccgctggccggggaacctgcgcgaactgcgcaatgcgctc
gaatatgcgagggcggtttgcagccacaaacatatcgaagcggatgacctccccgaaggc
ataggcgacaccgcgaaggaaaccgtcgcggagcctgcgtgttccgatccggccgcgcat
ccggcccatgtgtcgcaaggaaacacgttgccgcccgagggcatcgtgctcatgcagcac
ctgcgcgcctcgggctggaacctgagtgccgttgcgcgcgagatcggtatcagccgcatg
acactgtaccgccgcatggcgcgctacgggattcagtcgcctaaccgcagcgacgccaaa
gcgggcgatatctcgcgctga
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