Burkholderia sp. CCGE1003: BC1003_2270
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Entry
BC1003_2270 CDS
T01314
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
bgf
Burkholderia sp. CCGE1003
Pathway
bgf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bgf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BC1003_2270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgf03400
]
BC1003_2270
DNA repair and recombination proteins [BR:
bgf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BC1003_2270
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BC1003_2270
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
UB2H
AAA_22
Kinesin
DUF6827
Motif
Other DBs
NCBI-ProteinID:
ADN58223
UniProt:
E1TD08
LinkDB
All DBs
Position
1:complement(2678479..2680572)
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AA seq
697 aa
AA seq
DB search
MSEQHLTEAEDALDESKFVRFEGSPFQLYQPYPPAGDQPTAIDTLVEGIEDGLSFQTLLG
VTGSGKTFTMANTIARLGRPAIVFAPNKTLAAQLYSEFREFFPRNAVEYFVSYYDYYQPE
AYVPQRDLFIEKDSSINEHIEQMRLSATKSLMERRDVVIVATVSAIYGIGNPSEYHQMIL
TLRTGDRLGQRDIIARLIAMQYNRNEADFQRGSFRVRGDTIDIFPAEHAEMAVRVELFDD
EVETLQLFDPLTGRVRQKIPRFTVYPSSHYVTPRDTVVRAVETIKAELRERLEFFYSEGK
LVEAQRLEQRTRFDLEMLQELGFCKGIENYSRHFSGAAPGEPPPTLVDYLPSDAIMLLDE
SHVLIGQLNGMYNGDRARKENLVDYGFRLPSALDNRPLKFNEFERKMRQVVFVTATPAEY
EKKTSGQVAEQLVRPTGLVDPEIEVRPARSQVDDVLAEINERVAAGDRVLVTVLTKRMAE
QLTEFLADHGIKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAI
LDADKEGFLRAERSLIQTIGRAARNVNGKAILYADKVTDSMRRAIDETERRRAKQIAFNL
EHGITPRGVVKRIRDIIDGVYNVDDARAELKEQQTRAKFEDMSEKQLAKELKRLEKQMME
HAKNLEFEKAAQTRDQLALLRQRVFGANVGDHVSGVE
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacaacatctgacagaagccgaagatgcgctcgacgaatccaaattcgtccgt
ttcgaaggctcgccgtttcagctttatcagccatatccgcccgccggcgaccagccgacg
gcgatcgacacgctcgtcgaaggcatcgaagacggtctctcgttccagacgctcctcggc
gtgaccggttcgggcaagaccttcacgatggccaacacgatcgcgcgccttggccgtccg
gctatcgtgttcgcgccgaacaagacgctcgcggcgcagctttactcggagttccgcgag
ttctttccgcgcaacgcggtcgagtatttcgtttcctactacgactactatcagccggaa
gcttacgtgccgcagcgcgacctgttcattgaaaaggactcgtcgatcaacgagcacatc
gagcagatgcgtctgtcggccactaaaagcctgatggagcggcgtgacgtggtgatcgtc
gcgaccgtgtcggccatttacggtatcggcaatccgtccgaataccaccagatgatcctg
actctgcgcaccggcgacaggctcggccagcgcgacatcatcgcgcggctgatcgccatg
cagtacaaccgcaatgaagcggactttcagcgtggctcgttccgcgtgcgcggcgatacg
atcgacattttccccgccgagcatgcagaaatggcggtgcgtgtcgaattgttcgacgac
gaagtggaaacactacaactcttcgatccgctcaccggacgcgtgcgtcagaagattccg
cgtttcacggtttatccgtcgtcgcactatgtgacgccgcgcgataccgtcgtgcgagcc
gtggaaaccatcaaggctgagctgcgcgagcggctggagtttttttacagcgaaggcaag
ctggtcgaagcgcagcggctcgagcagcgcacccgtttcgatctggagatgctgcaggag
ctcggcttctgcaagggcatcgagaactactcgcggcacttttccggcgcggcgcccggc
gagccgccgcccacgctggtcgattatttgccgtcggacgcaatcatgctgctcgacgag
tcgcacgtgctgatcggccagttgaacggcatgtacaacggcgaccgcgcgcgtaaggaa
aatctggtcgactacggtttccggctgccgtccgcattggacaaccggccgctgaagttc
aacgaattcgagcgcaagatgcgtcaggtcgtgttcgtaacggccacgccggccgagtac
gagaagaagacctcggggcaggtggccgagcagctggtgcgcccgaccgggcttgtcgat
ccggaaatcgaggtgcggcccgcgcgcagccaggtggacgacgtgctcgccgaaatcaac
gagcgcgtcgccgcgggcgaccgcgtgctggtcaccgtgctgaccaagcgcatggccgag
cagctcacggagtttctcgccgaccacgggatcaaggtgcgctacctgcacagcgatatc
gacaccgtggagcgcgtcgagatcatccgcgatttacggcttggtactttcgacgtgctg
gtcggtatcaacctgttgcgcgaaggcctggatattcctgaagtgtcgcttgtcgcgatt
ctcgacgcggacaaggaaggcttcctgcgcgcggagcgctcgctgatccagaccatcggc
cgggcggcgcgtaacgtgaacggcaaggcgattctttacgccgacaaggtgacggactca
atgcgccgcgctatcgacgaaaccgagcggcggcgggcgaagcagatcgcgttcaacctc
gaacacggcatcacgccgcgcggcgtggtcaagcgcattcgcgacattatcgacggcgtg
tacaacgtggacgatgctcgcgccgagttgaaggagcagcaaacccgcgccaagttcgag
gacatgtccgagaagcaactggcaaaggaactgaagcgcctcgaaaagcagatgatggag
cacgcgaagaacctcgagttcgagaaggccgcgcaaacgcgcgaccagctcgcgctcctg
cggcagcgggtgttcggcgcgaacgtcggcgatcacgtgtcgggtgtcgagtaa
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