Burkholderia sp. CCGE1003: BC1003_3204
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Entry
BC1003_3204 CDS
T01314
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bgf
Burkholderia sp. CCGE1003
Pathway
bgf00300
Lysine biosynthesis
bgf00470
D-Amino acid metabolism
bgf01100
Metabolic pathways
bgf01110
Biosynthesis of secondary metabolites
bgf01120
Microbial metabolism in diverse environments
bgf01230
Biosynthesis of amino acids
Module
bgf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bgf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BC1003_3204
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BC1003_3204
Enzymes [BR:
bgf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BC1003_3204
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
S-methyl_trans
SH3BP5
Motif
Other DBs
NCBI-ProteinID:
ADN59151
UniProt:
E1TBB7
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All DBs
Position
1:3721425..3722687
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AA seq
420 aa
AA seq
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MTRPAFDYVDGVLHAEGVSAVSLAEQFGTPLYVYSRAALTEAWNAYASACAGRRASVHVA
VKANSNLAVLNVFARLGAGFDIVSGGELARVLAAGGKAENTVFSGVGKHANEMREALAAG
VKCFNVESIPELDRLNAVAAQMGKKAPVSLRVNPDVDAKTHPYISTGLKSNKFGVAFDEA
RATYQAAAAMANLEVVGIDCHIGSQITEVAPYLDAVDKLLELVEQIEQDGMTIRHIDVGG
GLGITYDDETPPDISDFVRTVLDRIEARGHGHREVYFEPGRSLVGNAGVLLTRVEFLKPG
AEKNFAIVDAAMNDLARPAMYEAYHAIDAVVQRELPAHVYDVVGPVCESGDWLGRERLLA
VEPGDLLAIRSAGAYGFVMSSNYNTRPRAAEVMVDGTQAHVVRAREEVQQLFAGETVLPE
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgactcgacccgcatttgactacgtcgacggcgtgcttcacgccgaaggcgtgtccgcc
gtttcgctcgccgaacagttcggcacgcccctctacgtgtactcacgcgcggcgctgacc
gaagcgtggaacgcctacgcgagcgcgtgcgccggccgtcgcgcgagcgtgcacgtcgcc
gtgaaggccaacagcaatctcgcggtgctgaacgtgttcgcgcggcttggcgcgggcttc
gacatcgtgtcgggcggcgaactggcgcgcgtcctcgcggccggcggcaaagcggaaaac
acggtgttttccggcgtcggcaagcatgcgaacgaaatgcgcgaggcgctcgccgccggc
gtcaaatgcttcaatgtcgagtcgattccagagctcgaccgtctgaacgcggtggcggcg
caaatgggcaagaaggcgccggtttcgctgcgcgtgaaccccgacgtcgacgcgaaaacg
cacccctacatttccaccggactgaagtcgaacaagttcggcgttgcattcgacgaggcg
cgcgccacctatcaggcggcggcagccatggcgaacctggaggtggtcggtatcgactgc
catatcggctcgcagattaccgaagtcgcgccgtacctcgacgcggtagacaagctcctg
gaactggtcgaacagatcgagcaggacggcatgacgattcgccatatcgacgtcggcggc
ggtctaggtattacctacgacgacgaaacgccccccgacataagcgatttcgtgcgcacc
gtgctcgaccggatcgaggcacgcggtcacggccatcgcgaggtgtatttcgagccgggc
cgttcgctggtcggcaatgcaggcgtgctgctcacgcgcgtcgagtttctgaagccgggc
gctgaaaagaacttcgcgatcgtcgacgcggccatgaacgatctcgcccgccccgcgatg
tacgaggcgtatcacgccatcgacgccgtggtccagcgcgaactgcctgcacatgtgtac
gacgtggtgggcccggtgtgcgaaagcggtgactggctcgggcgcgagcggctgctcgcc
gtcgagccgggcgatctgctggcgattcgttcggccggcgcctatggcttcgtgatgagc
tcgaactacaacacccgcccgcgtgccgcggaggtgatggtggatggtacacaagcgcat
gtggttcgcgcccgcgaggaagtgcagcagctgttcgcaggcgaaacagtcttgccggag
taa
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