Burkholderia sp. CCGE1003: BC1003_3215
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Entry
BC1003_3215 CDS
T01314
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bgf
Burkholderia sp. CCGE1003
Pathway
bgf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bgf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BC1003_3215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgf03021
]
BC1003_3215
03400 DNA repair and recombination proteins [BR:
bgf03400
]
BC1003_3215
Enzymes [BR:
bgf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BC1003_3215
Transcription machinery [BR:
bgf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BC1003_3215
DNA repair and recombination proteins [BR:
bgf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BC1003_3215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ADN59162
UniProt:
E1TBC8
LinkDB
All DBs
Position
1:complement(3734392..3735369)
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AA seq
325 aa
AA seq
DB search
MQTSLLKPKIIAVESLGESHAKVVMEPFERGYGHTLGNALRRVLLSSMIGYAPTEVTIAG
VVHEYSTLDGVQEDVVNLLLNLKGVVFKLHNRDEVTVTLRKEGEGVVTAGEIELAHDCEV
INPDHVIAHLSKGGKLDVQIKVEKGRGYVPGNVRRYGEESAKIIGRIVLDASFSPVRRVS
YAVESARVEQRTDLDKLVMNIETNGVISPEEAIRQSARILVDQLSVFAALEGTEATAEAP
SRAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLDK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccagtttgttgaagcccaagatcatcgcagttgaatcgctgggcgaaagccac
gcgaaagtggtcatggaaccgtttgaacgcggttacggccacaccttgggtaacgcgctc
cggcgcgtgctgctgtcgtccatgatcggctatgcgccgaccgaagtgacgatcgcaggc
gtcgtacacgagtattcgacgctcgacggtgtgcaagaggatgtggtcaacctgttgttg
aacctgaagggcgtggtgttcaagctgcataaccgtgacgaagtgacggttacgctgcgc
aaggaaggcgaaggcgtggttaccgccggcgaaattgaactggcgcacgattgtgaagtg
atcaatcctgatcacgtgatcgcgcatctgtcgaaaggcggcaagctcgacgttcagatc
aaggttgagaagggccgcggctacgtgccgggcaacgtgcgtcgttacggcgaagaatcg
gccaagatcatcggccgtatcgtgctggacgcgtcgttctcgccggttcgccgcgtgagc
tacgctgtggaaagcgcgcgtgtcgaacagcgtaccgacctcgacaagctcgtgatgaac
atcgaaaccaacggtgtgatttcgcctgaagaagcgatccgtcaatcggctcgaattctg
gtggaccaactgtcggtgttcgctgcactggaaggcaccgaagcgacggctgaagcaccg
tcgcgcgcgccgcagatcgatccgatcctgctgcgtccggtcgatgacctcgaactgacg
gttcgttccgcgaactgcctgaaggccgagaacatctactacatcggcgatctgatccag
cgtaccgaaaacgaactgctcaagacgccgaacctgggccgcaagtcgctgaacgaaatc
aaggaagtactggcgtcgcgtggtctgacgcttggcatgaagctggagaactggccgccc
gcagggctggacaagtaa
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