Burkholderia sp. CCGE1003: BC1003_3247
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Entry
BC1003_3247 CDS
T01314
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bgf
Burkholderia sp. CCGE1003
Pathway
bgf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BC1003_3247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgf03019
]
BC1003_3247
03400 DNA repair and recombination proteins [BR:
bgf03400
]
BC1003_3247
Enzymes [BR:
bgf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BC1003_3247
Messenger RNA biogenesis [BR:
bgf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BC1003_3247
DNA repair and recombination proteins [BR:
bgf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BC1003_3247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
ADN59194
UniProt:
E1TBG0
LinkDB
All DBs
Position
1:complement(3753372..3755219)
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AA seq
615 aa
AA seq
DB search
MSRPLEILNEVFGYPAFRGQQGEIVEHVASGGDCLVLMPTGGGKSLCYQIPSLVRRERGL
GTGIVVSPLIALMQDQVAALTEVGVRAAYLNSTLSSAEAMATERALRDGEIDLLYVAPER
LLTPRFQELLERTRIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPNVPRIALTATAD
AITRDEIIHRLALDDARVFVSSFDRPNIRYRIVEKDNARTQLLDFIRAEHTRADGTTDAG
VVYCLSRRKVEETAEWLKEKGMRALPYHAGMEFETRQKHQEMFQREEGIVMCATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGMPSNAWMAYGLGDVVQQRKMIDESDADD
AHKRVQTGKLDALLGLCEAATCRRVRLLAYFGESSKPCGNCDNCLEPPATWDATREAQMA
LSCVFRAQRASGFNFGAGHLIDILRGNRSEKILQRGHEKLTTFGIGAALGEPEWRAVFRQ
LVAFGYLTVDHEGFGSLVLTEASKPVLKGEQSVTMRRYVKPTRTRQSSGRTSERADPTVG
MGPRERARWERLRAWRTETAKSDGVPAYVIFHDATLAEIARNGPDSIEDLRGIPGMGARK
LDRFGEELLEVVAAD
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtccgctcgaaattctcaacgaagtttttggctaccccgcatttcgaggacag
cagggcgaaattgtcgagcacgtcgccagcggcggcgactgtctcgtgctgatgccaacg
ggtggcggcaaatcgctgtgttaccagattccgtcgcttgtgcgccgtgagcgcggcttg
ggcacaggcatcgtggtgtctccgctgatcgcactcatgcaggatcaggtcgctgcgctc
acggaagtcggtgtacgcgccgcttacctgaactccactctttcgagcgccgaggcgatg
gcgacggagcgcgcgctgcgcgacggcgagatcgacctgctttacgtcgcgccagaacgc
ttgctgacgccgcgttttcaggagctgctcgagcgcacccgtatcggcttgttcgcgatc
gacgaagcgcactgcgtgtcgcaatgggggcacgatttccggcccgaatacattcagctg
tcggtgctgcacgagcgtttccccaacgtgccgcgcattgcgctgactgccacggcggac
gcaatcacgcgcgacgagatcatccaccgtcttgcgctggacgacgcgcgtgttttcgtg
tcgagcttcgaccggccgaacatccgctaccggatcgtcgaaaaggacaatgcgcgtacg
caattgctcgactttatccgcgccgagcatacgcgcgccgacggcacgaccgacgccggc
gtcgtctattgcctgtcgcggcgcaaagtagaagaaacggccgagtggctcaaggaaaaa
ggcatgcgcgcgctgccttatcacgcaggcatggaattcgagacgcggcagaagcaccag
gaaatgttccagcgcgaagagggcatcgtgatgtgcgcgacgatcgccttcggcatgggt
atcgacaagcccgacgtgcgctttgtcgcccacctggatttgccgaagagcgtcgaaggc
tattaccaggaaaccggccgcgcggggcgcgacggcatgccgtccaacgcgtggatggcc
tatggactcggcgacgtcgtccagcagcgcaagatgatcgacgagtccgacgccgacgac
gcccacaagcgcgtgcaaacgggcaagctcgatgcacttctgggcttgtgcgaagcagcg
acctgtcggcgcgtgcgattgctcgcttatttcggcgaatcgagcaagccttgcggcaac
tgcgacaactgcctcgagccgccggccacctgggacgcgacgcgcgaggcgcagatggcg
ttgtcctgcgtgttccgcgcgcaaagggcaagtggtttcaacttcggcgccggccatctg
atcgacattctgcgcggcaaccgcagcgagaaaatactgcagcgcggtcatgagaagctg
actaccttcggcattggcgcggcgctcggcgaaccggaatggcgcgcggtgtttcgccag
ctggtggcgttcggctatctgacggtggaccacgaagggttcggctcgctggttcttacc
gaagccagcaagccggtgctgaaaggcgagcagagcgtcacgatgcgccgctatgtgaag
cctacgcgcacgcgtcagtcgtcggggcggacgagcgagcgcgcggatcccacggtcggc
atggggccgcgcgagcgcgcgcgctgggaacggctgcgcgcgtggcgcacggaaaccgcg
aagagcgacggcgtgcctgcgtatgtgattttccacgatgccacgctcgcggagatcgcc
cgcaacggccccgattcgatcgaggatctgcgcggcattccaggcatgggcgcccgcaag
ctggaccgtttcggcgaagaactgctggaagtcgtcgctgcggattga
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