Burkholderia sp. CCGE1003: BC1003_3506
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Entry
BC1003_3506 CDS
T01314
Name
(GenBank) AlkA domain protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bgf
Burkholderia sp. CCGE1003
Pathway
bgf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bgf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BC1003_3506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgf03400
]
BC1003_3506
Enzymes [BR:
bgf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
BC1003_3506
DNA repair and recombination proteins [BR:
bgf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BC1003_3506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ADN59450
UniProt:
E1T4H6
LinkDB
All DBs
Position
1:complement(4052823..4053740)
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AA seq
305 aa
AA seq
DB search
MSTLEHVATLELPYKAPFDWPRLLRFFRGRATPGVETVEDDAYRRAIEWSGESGTLSVRR
HARKRCLVASIEGPVSRHADALAAPIAKMFDLHADPRKIGAALAADPWLAPLVEAAPGLR
VPGAWSGFELVVRAIVGQQISVKGATTIIGRLVQRAGERIEGHAHENTAWRFPTPQALAT
VDLAQIGMPGKRVAALQGFARAVASGDVPLDNAGIDTDSLRAALLALPGIGPWTVEYVAM
RAWRDPDAWPAWDLVLMQSISARDPSLVRPTQQRTRTDGWRPWRAYAAMHLWNEVADRAG
AARGG
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacgctcgagcacgtcgcaactcttgaacttccctataaagccccgttcgactgg
ccgcgcctcttgcgctttttccgtggccgcgcgacgcctggcgtcgaaaccgtcgaagac
gacgcgtatcgccgcgcgatcgaatggtccggagaaagcggcacgctcagcgtgcgtcgg
catgcgcgcaagcggtgtctggtggcgagcatcgaaggcccggttagccgtcatgccgac
gcgcttgccgcgccgattgcgaagatgttcgacctgcacgccgatccgcggaaaatcggc
gccgcgcttgccgcggacccgtggcttgcgccgcttgtcgaggcggcgcccggcttgcgt
gtgcctggcgcatggtccggtttcgagctggtcgtgcgcgccattgtcggtcaacagatc
agcgtgaagggtgcaaccaccatcatcggccggctggtgcagcgcgcgggcgagcgcatc
gaagggcatgcgcatgagaacaccgcatggcgctttccgacgccccaggccctcgctacc
gtcgatctcgcgcaaatcggcatgccgggcaaacgcgtggcggcgctgcaaggctttgcg
cgcgccgttgcgagcggcgacgtgccgctcgacaacgcgggcatcgacacggatagtctg
cgtgccgcgttgctcgccctgccgggcatcggcccgtggacggtcgaatacgtggcaatg
cgcgcgtggcgcgatcccgacgcgtggccggcgtgggacctggtgctgatgcagtcaatc
agcgcgcgcgatccgtcactcgtgcgacccacgcagcagcgcacccgcaccgacggctgg
cgcccgtggcgcgcgtacgccgcaatgcatctgtggaatgaagtagcggaccgggctggg
gccgcgcgcggcggctag
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