Burkholderia sp. CCGE1003: BC1003_3799
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Entry
BC1003_3799 CDS
T01314
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
bgf
Burkholderia sp. CCGE1003
Pathway
bgf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bgf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BC1003_3799
Enzymes [BR:
bgf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
BC1003_3799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS_4
PAS
PAS_8
GGDEF_2
Diguanyl_cycl_sensor
PAS_3
Motif
Other DBs
NCBI-ProteinID:
ADN59738
UniProt:
E1TJB8
LinkDB
All DBs
Position
2:315120..317123
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AA seq
667 aa
AA seq
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MNDDQHEQVLYAQFGTSSPCWRLSSDSNALELTPVTGDVPANVAIPLNPQQAAQIRCLTG
ITSHLVLDVRMFGEPLRLHLVGRKINSSNWAGTASAYDDTESVARDLMHGLSFAEQVVSE
VNSVVVIVDRHGRIQRFNRLAEELTGVKEENIVGRNVWALFMSSEDGAASSQNITGFFNR
GVSYEVERRVKTLQGERLFLFRNKFVQSGSGVDEQYLICSGTDITEERLAQERLTQLANT
DSLTGLANRNAIQDKIRSAIEEAAPGESVGVLFLDLDNFKKVNDHYGHVFGDRLIRDVSA
AIGACLNEGDTLARLGGDEFIVLAAKGTAQELEATAQRILERMRTPFSLGLVEVYTGCSI
GIARYPEHGDNLESLIRSADTAMYVAKDAGKRTHRVFSPEMNRKVAEYMWLDTNLRRGLE
EGQLTLHYQPKLLLSTGAVQGVEALVRWNSPERGQIMPVEFIRYAEESGLIGVLGRWVMQ
TAAKQAAKWKADGYNLRIAINVSARQLVDTAVVRHFTEALAEARLDPCLVDVELTESCLI
EDEAAAIDLIKQFRQIGAQVHLDDFGTGYSSLSQLGRIPLDVIKLDRSFVRSINTDSKAQ
ALVRSMVVVAQELGFKVVAEGIETESEEAFMKGLDVEYVQGYLYAHPMPAADFERWLQDR
QKLRLIA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacgaccaacacgagcaggtgctttatgcgcagttcggcacaagcagcccttgc
tggcgtctgtcgagcgacagcaatgcgctcgaactgacgccagtcacgggcgacgtgcca
gccaacgtggccattccgctgaatccccagcaggcagcgcagatccgctgcctcacgggt
atcacgtcgcacctggttctcgacgtgcgaatgttcggcgagccgctgcggctgcatctg
gtgggcagaaagatcaacagcagcaactgggccggcaccgcctccgcttatgacgacacc
gaatctgtcgcgcgcgatctgatgcacggtctgtcgttcgcggaacaggtggtgtccgaa
gtcaattcggtcgtggtgatcgtcgaccggcacgggcgtatccagcgctttaaccggctc
gcagaagaactcaccggcgtgaaggaagagaacattgtcgggcgcaacgtatgggcgctt
ttcatgtcctccgaagacggcgccgcgtcgagccagaacattacgggcttcttcaatcgc
ggcgtgtcgtatgaagtggaacggcgcgtgaaaacgctgcagggcgaacggctctttctg
tttcgcaacaagttcgtgcaaagcggcagcggcgtggacgagcaatacctgatctgctcg
ggcaccgacattaccgaggaacggctcgcgcaggagcgtctcacgcagctggcgaacacg
gattcgctcaccggactcgccaatcgcaatgcgattcaggacaagatccgcagcgcgata
gaagaagccgctcccggcgaatcggtcggcgtgctgtttctcgatctggacaacttcaag
aaggtcaacgaccactacggccatgtgttcggcgaccgtctgattcgcgacgtgtccgcg
gcaatcggcgcgtgcctgaacgaaggcgacacgcttgcgcggctcggcggcgacgagttc
atcgtgctcgcggccaagggcacggcgcaggaactggaagccaccgcgcagcgcatactc
gagcgcatgcgtacgcccttcagcctcgggcttgtcgaggtgtatacgggctgctcgatc
ggcatcgcgcgctatccggagcacggcgacaatctggagtcgctgatccgctcggccgat
accgcaatgtacgtcgcgaaagacgcaggcaagcgcacgcaccgcgtgttctcgccggaa
atgaaccgcaaggttgccgaatacatgtggctcgacacgaacctgcggcgcgggctcgaa
gaaggccagttgacgctgcactatcagccgaagctgctgctttcgaccggcgcggtgcaa
ggcgtggaagcgctggtacgctggaattcgccggaacgcgggcagatcatgccggtcgag
ttcattcgttatgccgaagaatcaggtctgatcggcgtgctcggccgctgggtcatgcaa
acggccgccaaacaggccgccaaatggaaagccgacggttacaacctgcgcattgcgatc
aatgtgtcggcacggcaactggtggacacggccgtggtccggcatttcaccgaagcgctt
gccgaggcgagactcgacccctgtcttgtcgatgtggaactgaccgaaagctgtctgatc
gaggacgaagccgccgcaatcgacctcatcaagcagtttcgccagatcggcgcgcaggtg
catctggacgacttcgggaccggctattcgtcgctctcgcaactgggccgcattccgctt
gacgtaatcaagctggatcgcagtttcgtgcgttccatcaacaccgactccaaagcgcaa
gcgctggtgcgctcgatggtcgtggtcgcgcaggaactgggtttcaaggtggtcgccgaa
gggatcgaaacggagtccgaagaggcgttcatgaaggggttggatgtcgaatacgtgcag
ggctatctgtacgcacaccctatgcctgccgcggatttcgagcgctggctgcaggaccgg
cagaagctcaggctgatcgcctga
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