Burkholderia sp. CCGE1003: BC1003_4489
Help
Entry
BC1003_4489 CDS
T01314
Name
(GenBank) GAF modulated sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
bgf
Burkholderia sp. CCGE1003
Brite
KEGG Orthology (KO) [BR:
bgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bgf03000
]
BC1003_4489
Transcription factors [BR:
bgf03000
]
Prokaryotic type
Helix-turn-helix
Other families
BC1003_4489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_lid_14
GAF
PAS_4
HTH_30
HTH_23
HTH_7
AAA
HTH_29
AAA_5
AAA_16
HTH_28
Parvo_NS1
HTH_Tnp_ISL3
HTH_22
AAA_22
AAA_7
AAA_2
Xre-like-HTH
NUMOD1
HTH_Tnp_IS1
HTH_17
TIP49
Motif
Other DBs
NCBI-ProteinID:
ADN60421
UniProt:
E1TFZ4
LinkDB
All DBs
Position
2:1107792..1109765
Genome browser
AA seq
657 aa
AA seq
DB search
MRDDTYHAVTPLAPREACWLTPSIQKSHERSEVFGLSESMRPDYDVLPAAELALKLEQNR
ILCAHATPVMETLHEQIVNTQSMIVLTDAEGLILHSIGDDDFLQRAEKVALRPGANWAES
RQGTNAIGTALAERTATVVHGQQHYLAANRFLTCSSVPILDPYGDLIGVLDVTGDHRSYH
QHTMALAKMSVQMIENHLFANTFRDTLQIAFHGRPEFLGTLMEGIAAFTCDGRFLSANRS
AQFQLGLPLAGLRAHTLSSLFGLTSAQLLDRLSMQRDRHLSLNLSNGAVVCAHVQLRRGT
VADEPSRPRVQTPPPATQRSERAAAAANPLSKLSSLDTGDPQIAAVITKVRKVIGKNIPI
LITGETGTGKELLAQAIHNDSPRHAGPFVAVNCASIPETLIESELFGYEEGAFTGARRKG
AVGKLLQANGGTLFLDEIGDMPYPLQVRLLRVLQERLVNPLGSAKSIPVDVAIICATHRD
LREMIAQARFREDLYYRLNGLVVKLPPLRERTDLAAVIRKMLDNASAENAGGPPLTIADD
VMTLFEQCAWPGNFRQLGNLLRTAAVMVDEDGEIRREHLPDDFFDDLRAVGPTSAQKAGV
LPLPTGRLHDVAASVIANALAQHGGNVSAAARTLGISRNTIYRKLPAHGANHSEDAA
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgacacgtatcacgccgtaaccccgctcgccccgcgcgaggcttgctggctg
acgccgtccattcagaagtcccatgaacgctcggaagtatttggtttgagcgagtccatg
cgcccggactacgacgtgctgcccgcagccgaactggcattgaagctcgagcagaaccgc
attctctgcgcgcacgccacgccggttatggaaaccctgcatgagcagattgtgaacacc
caaagcatgatcgtgctgacggatgccgaagggctgatccttcattccatcggcgacgac
gacttcctgcagcgcgccgagaaggtcgccctcagacccggcgcgaactgggctgaaagc
cggcaaggcaccaatgcgatcggcaccgcgctcgcggaacgcactgctaccgtcgtgcat
ggccagcagcactatctggctgcaaaccgttttctgacctgctcgagcgtgccgattctc
gatccgtacggcgatctgatcggcgtgctcgacgtgaccggcgaccaccgcagctatcac
cagcacaccatggcgctcgcgaaaatgtcggtgcagatgatcgaaaatcatctgttcgcc
aatacgtttcgcgacaccttgcagatcgcctttcacggccgtccggagtttctgggcacg
ttgatggagggcatcgccgcattcacgtgcgacggccgcttcctgtccgcgaatcgcagc
gcgcaattccagctcggcctgccgcttgccgggctgcgggcgcatacgctgtcgtcgctg
ttcgggctcacgagcgcgcagctgctcgaccgtctgagcatgcagcgcgaccgtcacctg
tcgctgaacctgagcaacggcgcggtggtttgcgcacacgtccagttgcgccgcggcacg
gtggccgatgagccctcccggccacgcgtgcagactccgccgcccgcaacgcagcgcagc
gaaagagccgcggcggccgcgaatccgctgtcgaaactaagctcgctcgacacaggcgac
ccgcagatcgcggcggtcatcaccaaggtacgcaaggtgatcggcaagaacattccgatc
ctcattaccggcgagacgggcactggcaaggaactgctcgcgcaagccattcacaacgat
tcgccgcgacatgccgggccgtttgtcgcggtgaactgcgcgtcgataccggaaacgctg
atcgaatcggaactgttcggctacgaggaaggcgccttcaccggcgcgcggcgcaagggc
gctgtcggcaaactgctgcaggccaacggcggcacgctttttctcgacgagatcggcgac
atgccctatccgttgcaagtgcggctgctgcgcgtactgcaggagcgcctggtgaatccg
ctcggctccgcgaagtcgattccggtggatgtcgcgatcatttgcgcgacccatcgcgat
ctgcgcgaaatgattgcgcaggcccgctttcgcgaggacctgtactaccggctcaatggc
cttgtcgtcaagctgccgccgctgcgcgagcgtaccgatttggccgcagtaatcagaaag
atgctggataacgcatcggccgagaatgccggcggcccgccactcaccattgcggacgac
gtcatgacgctgttcgagcaatgcgcgtggccgggcaatttccgccagttgggcaacctg
ctgcgcaccgcggccgtcatggtggacgaagatggcgagatccgccgcgagcatttgccg
gacgacttcttcgacgacctgcgcgccgtcggtccgacatctgcgcaaaaagcgggcgta
ttgccgctgcccacagggcggctgcacgacgtcgccgcaagcgtgattgccaacgcgctc
gcacagcacggcggcaacgtgtcggctgcggcacgcacgctcggcatctcgcgcaatacg
atctaccgcaagctgccggcgcacggcgcaaatcacagcgaagacgcagcgtaa
DBGET
integrated database retrieval system
