Burkholderia sp. CCGE1003: BC1003_4920
Help
Entry
BC1003_4920 CDS
T01314
Name
(GenBank) Squalene/phytoene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
bgf
Burkholderia sp. CCGE1003
Pathway
bgf00100
Steroid biosynthesis
bgf00909
Sesquiterpenoid and triterpenoid biosynthesis
bgf01100
Metabolic pathways
bgf01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bgf00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
BC1003_4920
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
BC1003_4920
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bgf01006
]
BC1003_4920
Enzymes [BR:
bgf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
BC1003_4920
Prenyltransferases [BR:
bgf01006
]
Terpene biosynthesis
Squalene/phytoene synthase
BC1003_4920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
ADN60843
UniProt:
E1TJ27
LinkDB
All DBs
Position
2:1612221..1613267
Genome browser
AA seq
348 aa
AA seq
DB search
MPTPTRAFLLGPLLKGVSRSFYLTLRVLPAGMRDPIGLAYLLARAADTIADTSLIAPARR
LELLLSLRDQVNGVASDGALFQRMAAEVADQQSQSDEKVLLESLGPALDVLAQLSESDRK
AVREIVSTLTEGMEFDLRTFPDERSGRIAALHEYGELDRYTYLVAGCVGEFWTTMTYAHM
PGTLKAQPASMKARGVRFGKALQMTNVLRDCGKDLRIGRCYLPQTMLAQHGLSPQDLLLP
ANSLRARPLMVELLRKTLDHFREALEYTLAIPAFAVRLRLACLWPILIGLDTLLLLVDNA
AWLDPQQVSKVPRNQVYRIIGTSLLLVPSNALVRRAIERRIRDIEAKF
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgccgactccgacccgggcctttcttctcggcccgctcctgaaaggcgtatcacgctcg
ttttaccttacgctgcgcgtgttgccggcaggcatgcgcgatccgatcggcctggcatat
ctgctcgcacgggctgccgatacgatcgccgatacttcgctgatcgcgcccgcacggcgg
ctcgaattgctgctgtcgttgcgcgaccaggtcaacggcgtggcgagcgacggagcgcta
tttcagcgcatggctgctgaagtggcggaccagcagagccagtcggacgaaaaggtcctg
ctcgaatcgctcggccccgcgctcgacgtgttggcgcaattgagcgagtccgaccgtaaa
gccgtgcgcgagattgtttcgacgttgaccgaaggcatggagttcgacttgcgtacgttt
ccggacgaacgctcgggacgcatcgccgcactgcatgaatatggcgagcttgaccgctat
acgtatctggtggcgggttgcgtcggcgaattctggaccacgatgacatatgcgcacatg
cccggcacgctgaaggcgcagccggcgagcatgaaggcgcgcggcgtgcgtttcggtaag
gcgctgcaaatgaccaacgtattgcgcgattgcggcaaggacctgcggatcggccgctgt
tatctcccgcaaacaatgctcgcgcagcatggcctgagtccgcaggatcttctgctgccg
gccaattcgctgcgcgcgcgtccgctcatggtcgagctgttgcgcaagaccctcgaccac
ttccgcgaggcactggagtacacgctcgcaattcccgcgtttgcagtgcgtttgcggctg
gcgtgtttgtggccgattctcatcggtctcgacacgctcttgctgctcgtcgacaacgcg
gcgtggctcgatccgcagcaggtctcgaaagtgccgcgaaaccaggtgtaccgcatcatc
gggacttcgctgctgctggtgccgtcgaatgcgctggtgcgccgggcgatagagcgccga
atccgcgacatcgaagcgaagttctga
DBGET
integrated database retrieval system
