Burkholderia sp. CCGE1003: BC1003_4949
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Entry
BC1003_4949 CDS
T01314
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bgf
Burkholderia sp. CCGE1003
Pathway
bgf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BC1003_4949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgf03019
]
BC1003_4949
03110 Chaperones and folding catalysts [BR:
bgf03110
]
BC1003_4949
03029 Mitochondrial biogenesis [BR:
bgf03029
]
BC1003_4949
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bgf04147
]
BC1003_4949
Enzymes [BR:
bgf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
BC1003_4949
Messenger RNA biogenesis [BR:
bgf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BC1003_4949
Chaperones and folding catalysts [BR:
bgf03110
]
Heat shock proteins
HSP60 / Chaperonin
BC1003_4949
Mitochondrial biogenesis [BR:
bgf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
BC1003_4949
Exosome [BR:
bgf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BC1003_4949
Exosomal proteins of other body fluids (saliva and urine)
BC1003_4949
Exosomal proteins of breast cancer cells
BC1003_4949
Exosomal proteins of colorectal cancer cells
BC1003_4949
Exosomal proteins of bladder cancer cells
BC1003_4949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
EAD9
DNA_ligase_OB
Motif
Other DBs
NCBI-ProteinID:
ADN60872
UniProt:
E1TJ56
LinkDB
All DBs
Position
2:complement(1646883..1648505)
Genome browser
AA seq
540 aa
AA seq
DB search
MSAKDVRFHDSARSRIVKGVNVLADAVKVTLGPKGRNVVIERSFGAPVITKDGVSVAKEI
ELKDRFENMGAQVVKQVASKTADVAGDGTTTATVLAQSIVQEGMKHVAAGMNPMDLKRGI
DKAVAAVLDELMRTSKRISTSKEIAQVASISANADEAIGKIIADAMEKVGKEGVITVEDG
KSLDNELDVVEGMQFDRGYLSPYFINNPDRQAAYLDDPLILLYDKKISAVRDLLPILEAS
AKAGKPLFIIAEDVEGEALATLVVNSMRGVLKVAAVKAPGFGDRRKAMLEDIAVLTGATV
ISEETGKQLEKATLEDLGSAKRVEVRKDDTIIIDGAGQQQRIEARVKAIRAQIEETTSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALL
RARSAIANLKGANADQDAGIRIVLRALEAPLRVIASNAGDEPSVVIAKVLEGKGNFGYDA
STGQYGDLVEAGVVDPTKVTRTALQNAASVAGLILTTDATVAEAPKEEKPAAAAAPEMEY
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgaaagatgtcaggttccacgacagcgcccgtagccggatcgtcaagggcgtg
aacgtgctggccgatgcagtgaaagtgacgctcggcccgaaaggccgcaacgtggtgatc
gagcgcagcttcggcgcgccggtcatcaccaaggacggcgtgtcggtggcgaaagagatc
gagctgaaagaccgtttcgagaacatgggcgcgcaggtcgtcaagcaggtggcctcgaaa
acggccgacgtggccggcgacggcaccaccacggccacggtgctcgcgcaatccatcgtg
caggaaggcatgaaacacgtcgccgcgggcatgaacccgatggatctgaagcgcggcatc
gacaaggcggtcgcggccgtgctggacgaactgatgcggacttccaagcgcatctcgacc
agcaaggaaattgcccaggtcgcgtcgatctcggcgaatgccgacgaagcaatcggcaag
atcattgcggacgcaatggaaaaggtcggcaaggaaggcgtgattaccgtggaagacggc
aagtcgctcgacaacgaactcgacgtcgtggagggcatgcagttcgaccgcggctatctg
agcccgtacttcatcaacaatcccgacaggcaggctgcgtatctcgacgatccgctgatc
ctgctgtacgacaagaagatttccgcagtccgcgacctgctaccaattctcgaggcgtcg
gccaaggcgggcaagccgctcttcatcatcgcggaagacgtggagggcgaggcgcttgca
acgctcgtcgtcaattccatgcgcggcgtcctcaaggtggctgcagtgaaggcgcccggt
tttggcgaccgccgcaaggcgatgctcgaagacattgcggtgctcacgggcgcaaccgtc
atttccgaggaaaccggcaagcagctcgagaaagcgacgctcgaagacctcggcagcgcc
aagcgcgtggaagtgcgcaaggacgacacgatcatcatcgacggcgccgggcagcagcaa
cgcatcgaggcgcgcgtgaaagccattcgtgcgcagatcgaggaaaccaccagcgactac
gaccgcgaaaagctgcaggaacgcgtcgcgaagctcgcgggcggcgtcgccgtaatcaag
gtgggcgcggcgacggaagtcgagatgaaggaaaagaaagaccgcgtggacgatgcattg
cacgcgacccgtgccgcagtggaagaaggcattgtgccgggcggcggcgtggcactgctg
cgcgcccgctcggccattgctaacctgaagggcgccaacgcagaccaggacgcgggcatc
cgcatcgtcctgcgcgcgctggaagcgccgttgcgcgtgattgcttcgaacgcgggcgac
gagccctcggtcgtcatcgcgaaagtgctcgaaggcaagggcaatttcggttacgacgcg
tcgacgggacagtacggcgatctggtcgaagcaggcgttgtcgatccgaccaaagtgacg
cgcacggcgctgcagaacgcggcgtcggttgcgggcctcattctcacgacggacgcgacc
gtcgcggaagcgccgaaggaagaaaagcccgccgccgcggcagcgccggagatggagtac
taa
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