Burkholderia sp. CCGE1003: BC1003_5566
Help
Entry
BC1003_5566 CDS
T01314
Name
(GenBank) GAF modulated sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
bgf
Burkholderia sp. CCGE1003
Brite
KEGG Orthology (KO) [BR:
bgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bgf03000
]
BC1003_5566
Transcription factors [BR:
bgf03000
]
Prokaryotic type
Helix-turn-helix
Other families
BC1003_5566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_lid_14
HTH_8
AAA_5
HTH_29
HTH_IclR
HTH_30
HTH_23
HTH_7
HTH_22
MCM
HTH_17
HTH_28
HTH_Tnp_ISL3
IstB_IS21
AAA
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ADN61484
UniProt:
E1TFM0
LinkDB
All DBs
Position
2:complement(2323078..2325090)
Genome browser
AA seq
670 aa
AA seq
DB search
MSHRPATPSRIGRPDVIAQAHARSLELGLRASEMPDFHPLRRPALRELVDRNQSLFTHAL
PVMETLHAQIVDTQSMVLLTDSQGVVLHSLGDSDFVAKAKRVALCPGVSWAEADRGTNAI
GTALVDGQPTVVHADEHFLHANRILTCSCAPIADPFGRTIGALDVSGDTRGFHKHTLALV
RMSAQMIENHLFSNQFAEAVRVHFHARAEFIGTLFEGLAAFAADGTFLSANRSALFQFGQ
PLAALQAQPFEALFGVAFAHVLQRIAHAPRENVVLTLPSGVRVVARGEYSAQRYVGAAAD
SGETVNEPASDAARRAARAARPALPAATSTPATLQTLDTGDPQVSGILRRVAKVRGRDIP
ILILGKTGTGKEWLARAIHHDSPRRAAPFVALNCASLPDTLIEAELFGYEDGAFTGAKKR
GSVGKIVQADGGTLFLDEIGDMPLAQQVRLMRVLQERTVVPLGGTRAIPVDLRIVCATHR
NLRAMIEEGTFREDLYYRINGLVVTLPALCERTDLPALVTRMLELQNEGENVPRRVSQQV
LERFMSYRWPGNLRQLANVLRTAGIMAENADQIELADLPEDFLHDCADAAAKHSAARQPL
GTRANDDDTRGVPLDAPAQMPAPSRMEDWQATLIAQTLARLDGNVSAAARELGLARNTVY
RYLRRGGSTR
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
ttgagccatcgccccgccacgccgtcccgcatcggtcggcccgatgtcatcgcgcaagct
cacgcgcgctcgctcgaactcgggctgcgcgcgtccgaaatgccggattttcatccgctg
cgccggcctgcgttgcgcgaactggtcgatcgcaatcagtcgctcttcacgcatgcgctg
ccggtcatggaaacgttgcatgcgcaaattgtcgacacgcaaagcatggtgctgctcacc
gacagtcagggcgtggtcctgcatagtctcggcgacagcgatttcgtcgcgaaggccaag
cgcgtcgcgctgtgtccgggcgtgtcatgggccgaggccgaccgcggcacgaacgccatc
ggcacggcgctcgtcgatgggcaacccaccgtagtccacgccgacgagcacttcctgcac
gcgaaccgcattctcacctgctcgtgcgcgccgattgcggacccgttcgggcgcaccatc
ggcgcgctcgacgtgagcggcgacacgcgcggctttcacaagcacacgctcgcgctggtc
agaatgtcggcgcagatgatcgaaaatcatctgttctccaatcaatttgccgaggcagtg
cgcgtgcactttcacgcgcgcgcggaattcatcggcacgctgttcgaagggctcgccgcg
ttcgctgccgacggcacgttcctgtcggccaatcgcagcgcgctgttccagttcggacag
ccgctagcggcattgcaggctcagccgttcgaggcgctgttcggcgttgcctttgcccac
gtattgcagcggatcgcgcacgcgccgcgcgagaatgtggtgctgacgttgccaagcggc
gtacgggtggtcgcgcgcggcgaatattcggcgcagcgttatgtgggggcagcggcggat
agcggggagacggtgaacgaacccgcctcggacgccgcgcgacgcgcagcgcgggcggcc
aggccggcactgcccgccgccacgagcacgcctgccacgctccagacgctcgacaccggc
gacccgcaagtctcgggcattttgcggcgcgtcgccaaggtgcgcggccgcgacattcca
attctgattctcggcaagacgggcacgggcaaagaatggctcgcgcgcgccatccatcac
gactcgccgcggcgcgcggcacccttcgtcgcgttgaattgcgcgtccctgcccgacacc
ctgatcgaagccgagctgttcggctatgaggacggcgcattcaccggcgcgaaaaagcgc
ggcagcgtcggcaagatcgtgcaggccgacggcggcacgctgttcctcgacgaaataggc
gatatgccgctcgcacagcaggtgcggctcatgcgtgtgctgcaggaacgcacggtggtg
ccgctcggcggcacccgcgcgattccggtagacctgcgcattgtctgcgcgacgcaccgc
aatctgcgcgcgatgatcgaggaaggcaccttccgcgaagacctgtattaccgcatcaac
ggactcgtggtgacgttgcccgcgctttgcgagcgcaccgatctgcccgcgctggtcacg
cgcatgctcgaactgcaaaacgagggcgagaatgtgccgcggcgtgtttcgcagcaggtg
ttggaacgcttcatgagctaccgttggcccggcaatttgcggcaactcgcgaacgtgctg
cgcaccgcgggcatcatggccgagaacgcggatcagatcgagctcgccgatctgcccgaa
gacttcctgcacgattgtgccgacgcggcggcgaaacacagcgcggctcgccagccgctc
gggactcgagccaatgacgacgacacgcgcggggtgccactcgacgcgccggcgcagatg
ccagcgccgtcgcgcatggaagactggcaggccacgctgattgcgcagacattggcgcgg
ctcgacggcaacgtgtcggcggcggcccgcgaactgggactcgcccgcaataccgtgtac
cgctatttgcgccgcggcggctcgactcgctaa
DBGET
integrated database retrieval system
