Burkholderia sp. CCGE1003: BC1003_5594
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Entry
BC1003_5594 CDS
T01314
Name
(GenBank) outer membrane autotransporter barrel domain protein
Organism
bgf
Burkholderia sp. CCGE1003
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIDA
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
ADN61512
UniProt:
E1TFP8
LinkDB
All DBs
Position
2:2357429..2362015
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AA seq
1528 aa
AA seq
DB search
MKPLTYRRKYGMHRFGYSSARLSKLAWNLVQWSLYCVGMVAPSVVPGSAHANVITVPAGS
AYVGMTLSAGDAMYVEAGGNAAGTTVDGGGMLVVSSGGWASDTAPTSTHYAFTVSSGGEL
AVSAGGTAVGVAIGSGGILVTNTSATVSGTNSGGSFSISGNSAFNVLLESGGKLDVLTGG
SATYTFINSGGEQNVLSGGLADQSYVHSGGVENIQSGGLATNTFVYDGGTQNVFSGGSAS
VYTEVLTGGTQNVMSGGTAYATLLLGGVQNVSGGASASLTFVSSGSTQNVLSGAHATDTR
VSSGGSVVVSSGGAISALSVTAGGSATIAAGAALVASTSDTIVSGTNAAGTFSVANNTAH
SVLLENGGSLSVLNGGGSVDTKVNSGGTETVSAGGSSLDTFVTSGGRQLVYGLANGTTIT
NAGSQAVLLGGYASGSVVVSGGSISVAGGGSLAHPTALGGANLSIAQGGALIVDTSDQIV
SGTNASGTFSIANNTARSVLLENGGSLSVLNGGGSVDTIVNSGGTETVSAGGSALDTLVT
SGGRQLVYGLANGTTITNAGSQAVLLGGYASGSVVASGGSVSVASGGSLAHPTALGGANL
SIAQGGALIADTSDTIVSGTNASGAFSIANNTATHALLENGGVLTVLGGASSIDTIVNSG
GRELVSSGGVASGTTLNSSGTQSVLAGGSAFGATVNSGGAQQVASGGTASSTVVNGGGTQ
QVASGGTASSTVVNSGGTQQVASGGTASSTVVNGGGTQQVASGGTAISTVVSSGGVQDVI
SGATIVDARILSGGTQNVISGGTATGVTISAGGVQSVTSGTAHNTHVTSGGAQRVGAAGV
AIATILDGGALTVSSGGATSGTVVNSGGGETLSSGGTASGTTINSGGTQSILGGGVAYAT
TVNSGGLQYVDGVIEGYAYSTTVNSGGIQEVAFGGYASGTLVKAGGVQTVDSAGSAVDTM
VSGGTQTVLSGGSAFTTVVANGGVENILAGGYASGTTVSSGTVIVDGTAANLSVGNGAVV
TGSGTIASDLTLTSGSTLVARTFGTGLTVNGTLTFGSGSLYAVTVNAAGLSGVTAVVGNL
VIAAGSTLAVTASAGSYSAGTAYRIITYTGTQSGAFTAVNADFAYLTPSVSYSAGAVTLT
LNPSTDFTTPPATPATPGAPSAPTGFAIAATTRNQANVANALTRVYNAGGDALTTALLSA
SKSEASGALSQLSGDEVAIFQQVAQHRTSATQDVVAQRLAATASVATRNDLWASGNYQRT
HVSGDDSIGSSAYEDQSANLTLGYDRAVTHTVRIGGALAINDDTVQFSSRDANARVDGAQ
ALLYGSYMPAGTALYVNGLAGVGYWDNALKRSARVGAIAGSPEASFHTSSVAMYVETGFN
FASAIGTLQPYAGMRAGHYTQQGFGEHGGGAFNLDYASTNSNALSSVLGLRFLKGLGTLF
GHPLDWQTELAWEHRFGSTAQSVSAAFADAPLQTYQVFGTPSDRDAGRLVIGANWHANAR
TTVYAKLGAQAGSHTRNYEATAGAQWKW
NT seq
4587 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgttaacataccgccgcaagtacggcatgcatcgttttgggtactcgagtgca
aggctgtcgaagctggcctggaatctcgttcaatggagtctctattgcgtgggcatggtg
gctccgtctgttgttccgggcagcgctcatgccaatgtgattaccgtcccggcaggttcg
gcgtatgtaggcatgaccttgtcagccggcgacgcgatgtacgtcgaggccggcggcaac
gcggcgggcacgactgtcgatggcggcggcatgctggtcgtctcgagcggtggatgggcc
tcggacacggcgccgacctcgacccattacgccttcacggtgagcagcggcggggagctc
gccgtatcggcgggaggaaccgctgtcggcgtcgccatcggcagcggcgggatcctcgtg
acgaacacgtccgccacggtgtcaggcaccaactcaggaggctccttctcgatctcgggc
aattccgcgttcaatgtgcttctggagagcggcggcaagctcgatgtgctcacaggtggc
tcggcaacctacacgttcatcaatagcgggggagaacagaacgtactgtcaggtggactg
gcagaccagtcgtacgtccactcgggcggggtggaaaacatccagagcggcggcctcgct
accaacacctttgtctatgacggcggtacccagaacgttttcagcggtggcagcgcatcg
gtttatacagaggtcctcacgggcggcacgcagaacgtaatgtccggtggaaccgcctat
gcaaccttgctgctcggcggcgtgcagaacgtctcgggcggggcgtccgcgtcgttgacg
ttcgtcagcagcggctccacgcagaacgtgctgagcggcgctcacgctaccgacacacgg
gtttcttccggtggcagcgtggtcgtatcgagcggcggcgcgatatcggcgctaagcgtg
acggccggaggcagtgcaacgatcgcggcaggcgccgcgctggtcgccagtacttcggac
acgatcgtgtccggcaccaacgcggcaggcactttctcggtcgctaacaatacagcgcac
tccgtattgctcgagaatggcggcagtctgagcgtgctcaacggcggcggctcggtcgac
acgaaagtgaacagcggtggcacagaaacggtatcggcaggcggcagttcgctcgacacg
ttcgtgacctcgggaggccggcaactggtgtatggactggcgaacggcacgaccatcacc
aatgccgggtcgcaagcggtcttgctcgggggttacgcgagcggcagtgttgttgtttcc
ggcggttccataagtgttgcgggcggcggtagcctcgcgcatccgacggcgctcggcggc
gctaatctgtctatcgcgcagggcggcgcgctgatcgtggacacgtcggaccagatcgtg
tctggcacaaacgcgtccgggactttctcgatcgctaacaatacagcgcgctcggtattg
ctcgagaacggcggcagtctgagcgtgctcaacggcggcggctcggtcgacacgatagtg
aacagcggcggcaccgaaacggtatcggcaggcggcagcgcgcttgacacactggtgacc
tcgggaggccggcaactggtgtatggactggcgaacggcacgaccatcaccaatgccgga
tcgcaagcggtcttgctcgggggctacgcgagcggcagtgttgtcgcttccggcggttcc
gtaagtgtcgcgagcggcggtagcctcgcgcatccgacggcgctcggcggcgctaatctt
tccatcgcgcagggcggcgcgctgatcgcggacacgtctgacacgatcgtgtccggcacg
aacgcgtctggagcgttctcaatcgcgaacaacaccgcgacgcatgcgctgctggaaaac
ggcggcgttcttaccgtgctgggcggtgcttcgtccatcgacacgatcgtcaacagcggc
ggcagggagctcgtttcgtcaggcggagtggcaagcggcaccacgctcaactcgagcggc
acgcagagcgtgcttgcgggtggctcagcgttcggcgccaccgtcaacagcggcggcgct
cagcaagtcgcatcgggcggcacggcgagctcgacggtggtcaacggcggcggcacgcag
caggtcgcatcgggcggcacggcgagctcgacggtggtcaacagcggcggcacgcagcag
gtggcatcgggcggcacggcgagctcgacggtcgtcaacggcggcggcacgcagcaggtc
gcatcgggcggcacggcgatttcgacggttgtcagcagcggcggcgtgcaggatgtcatt
tcaggcgcgacgatcgtggatgcccgcattctgtcgggcggcacacagaacgtcatttcc
ggcggtacggccaccggcgtcacgatttccgcagggggcgtgcagtccgtgacgtcgggc
accgcccacaacacacacgtgacctcgggcggcgcgcaacgggtaggcgcggcaggcgtt
gccatagcaacgattctcgacggaggcgcgctcaccgtgtcctctggcggcgcgacgagc
ggtacggtcgtgaactcgggcggcggcgaaacgctgtcgtcggggggaactgcgtcgggc
acgacgatcaacagcggcggcacgcagtccattcttggcgggggcgtcgcttatgcgacc
acggtcaacagcggcggcctgcaatacgtggatggcgtgatcgaaggctacgcctatagc
accacggtcaacagcggcgggatccaggaagtggcattcggcggctacgcgtcgggcacg
ctggtcaaagcgggcggcgtccagaccgtcgattccgctggctcggcggtcgataccatg
gtgagcggcggcacgcaaaccgtactctccggcggctcggcgttcaccacggtggtcgcg
aacggcggcgtcgaaaacattcttgccggcggctacgcgagcggcacgacggtttcctcc
ggcacggttatcgtcgacggcacagcggccaacctgagcgtcggcaatggcgcggtggta
acgggtagcggcacgattgcctcggacctcaccctcacgagcggcagcacgctcgttgcc
cgtacgttcggtacgggactcacggtgaacggcacgctcacttttggcagcggctccttg
tacgccgtgaccgtcaacgcggcgggcctgagcggcgtcaccgccgtggttggcaacctc
gtcatcgcggccggtagcacgcttgcagtcactgcaagcgccggttcgtattcggctgga
acggcataccggatcatcacctacacgggtacgcaaagcggcgcgttcaccgcggtgaat
gcggacttcgcctacctgacgccatcagtcagttactcggcaggcgcggttacgctcacc
ctgaacccgtcgaccgatttcacgacgccacccgccacgcccgccacgcccggagcgccc
tcagcgcctaccgggttcgccattgcagccacgacgcgcaatcaggcgaacgttgccaac
gcattgactcgcgtctataacgccggcggcgacgcgcttaccacggcacttctgagcgcg
tcgaagagcgaggcgtccggtgcgctcagccagctatccggcgacgaagtggcgattttc
cagcaggtcgcccagcaccgcacgagcgcgacgcaggacgtcgttgcgcagcgcctcgcg
gccaccgcgtctgtcgcgacgcgcaacgatctgtgggccagcggcaattatcagcgcacg
catgtgtccggcgacgacagcattggcagcagcgcctatgaagaccagtcggcgaatctg
accctcggctacgaccgcgcggtgacccatacggtgcgaatcggtggtgcgctcgcgatc
aacgacgacaccgtgcagttttcgagccgtgacgcgaatgcacgggtcgacggtgcgcag
gcgttgctgtacggctcgtacatgcccgcgggcacggccttgtatgtgaacggccttgcg
ggcgttggctactgggacaacgcactcaaacgttcagcgcgtgtaggcgcgatagcgggc
tcgcccgaggcttcgtttcacacctcgagcgtggcgatgtacgtggagaccggattcaat
ttcgcgtccgcaatcggcaccttgcagccgtatgcgggcatgcgtgccggccattacacg
cagcagggctttggcgagcatggcggtggcgcgttcaatctggactacgcgtcgaccaac
agcaatgcgctatcgagcgtgctggggctgcgttttctcaaagggctcggcaccttgttc
ggtcatccgctcgactggcagacggagctggcgtgggagcaccgcttcggcagcacagcg
cagtcggtgagcgcggccttcgccgatgcaccgttgcagacgtatcaggtgttcggtacg
ccgtcggatcgcgacgccggacgtctcgtgattggcgcgaactggcatgccaatgcgcgc
accactgtgtacgcgaaactgggtgcgcaagcgggttcgcatacacggaactatgaggcg
acggccggcgcgcagtggaagtggtga
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