KEGG   Brachybacterium ginsengisoli: CFK41_01760
Entry
CFK41_01760       CDS       T05099                                 
Name
(GenBank) pectate lyase
  KO
K01051  pectinesterase [EC:3.1.1.11]
K01728  pectate lyase [EC:4.2.2.2]
Organism
bgg  Brachybacterium ginsengisoli
Pathway
bgg00040  Pentose and glucuronate interconversions
bgg01100  Metabolic pathways
bgg02020  Two-component system
bgg02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:bgg00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    CFK41_01760
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CFK41_01760
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CFK41_01760
Enzymes [BR:bgg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.1  Carboxylic-ester hydrolases
    3.1.1.11  pectinesterase
     CFK41_01760
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     CFK41_01760
SSDB
Motif
Pfam: Pectate_lyase_4 Pectinesterase Beta_helix
Other DBs
NCBI-ProteinID: ATG53646
UniProt: A0A291GU57
LinkDB
Position
398674..400209
AA seq 511 aa
MDALVMNIPPRPPESISRRHLARIGTAAIGSVAAVGAAPPLATARPAAGPEHSDAGAIDL
LRRMRVPPGPTSAGGPVWSALATGFAGVRTEDLPLGAVGGLGGTVVEVRDAEELSAALAL
DGPTVVLVHGTIVLPFGSMLEVGSRTSVLGVGRGAEIVGGGLRLLQVSDVVLRNITFRDS
FIGGDWDGKSEENDNDGIRVDTSDHVWIDHCEFVRLGDGQVDIRKDSTHVTVSWSILRDH
NKTLGVGWTDNVLTTLTLHHLWFSNTHQRNGSIDNTALCHVYNCLLDGSSSYGMASRGAA
QLLVEHSVFASVRNPIGVSDPESRVAQNGNLRDGTWGSWEDTGVDVDPADHYSYDLDPVE
DVRSLLARHAGPHARGEWTARQIHVSQDGSGDVRSVHAAVGAASRSPHPVEVIVHPGVYR
EVVTIWPRLEGLVIRGASGDPADVVLSYDKPAQDWATVTVLTSGVTLSALTLEAALEDGR
PAYPLRSIDDSLVLSDVVLLGGPHGISDPRS
NT seq 1536 nt   +upstreamnt  +downstreamnt
gtggacgccctggtcatgaacatccctccccgcccgccggagtccatctcccgccgtcac
cttgctcggatcggcacggccgcgatcggctccgtcgccgcagtcggggccgccccgcct
ctcgccacggcgcggccggccgccgggcccgagcactccgacgccggagcgatcgacctc
ctgcggcgcatgcgtgtgcccccggggccgacgtcggcaggagggcccgtctggtccgcc
ctcgcgaccggattcgcaggagtccgcaccgaggacctcccgctgggagcggtcggcggg
ctcggcgggactgtggtcgaggtgagggacgccgaggagctctccgcggcgctggccctc
gacggcccgacggtcgtgctcgtccacggcacgatcgtcctgcccttcgggtcgatgctg
gaagtcgggtcgaggaccagcgtcctcggcgtcggtcggggtgctgagatcgtcggcggg
ggcctgcgcctcctccaggtgagcgacgtcgtgctccgcaacatcacgttccgggactcg
ttcatcggaggggactgggacggcaagtccgaggagaacgacaacgacggcatccgcgtg
gacacctcggaccacgtctggatcgaccactgcgagttcgtccgcctcggcgacggccag
gtcgacatccgcaaggactccacccacgtgacggtctcctggagcatcctgcgggatcac
aacaagaccctcggagtcggctggaccgacaacgtcctcaccacgctgaccctgcaccac
ctctggttctccaacacccaccagcgcaacggcagcatcgacaacaccgccctgtgccac
gtctacaactgcctgctcgacggatcgagctcctacggcatggcctcccgaggggccgca
cagctgctcgtcgagcacagcgtcttcgcgtcggtgcgcaatcccatcggggtcagtgat
cccgagtcgcgggtcgcgcagaacggcaatctgcgcgacgggacgtgggggtcgtgggag
gacacgggggtcgacgtcgatccggcggatcactactcctacgatctcgacccggtcgag
gacgtccgctccctgctggcccgccatgcgggcccgcacgcccgaggcgagtggacggcc
cgacagatccacgtctcgcaggacggcagcggggatgtccgctcggtccacgccgccgtc
ggagccgcgtcccgctccccgcatccggtcgaggtcatcgtccatcccggtgtgtaccgg
gaggtcgtgaccatctggccacgcctcgaggggctcgtgatccggggtgcgagcggggat
cccgccgatgtggtgctcagctacgacaagcccgcacaggactgggccacggtcacggtc
ctcacctccggtgtgacgctcagcgcgctgactctggaagccgccctggaggatggtcgt
ccggcctacccgttgcgctcgatcgacgactccctcgtcctctcggacgtggtgctcctc
ggcggccctcacgggatctccgatccgcgctcctga

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