Brachybacterium ginsengisoli: CFK41_02825
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Entry
CFK41_02825 CDS
T05099
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
bgg
Brachybacterium ginsengisoli
Brite
KEGG Orthology (KO) [BR:
bgg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgg03400
]
CFK41_02825
DNA repair and recombination proteins [BR:
bgg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CFK41_02825
Archaeal homologous recombinant proteins
CFK41_02825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
ATG53832
UniProt:
A0A291GUJ5
LinkDB
All DBs
Position
661742..662905
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AA seq
387 aa
AA seq
DB search
MKILHTSDWHLGRTLHKVDLHEHQAAFLDWLVELVQAEQVDVVVVPGDVYDRAVPAVSSV
SLLDRALARLADTGATVVLTSGNHDSPERLGFGRSLMRAGIHLLTDVPGIEHPVIVEDEH
GEVLFFGLPYLEPDRARTELVAEGEPPLARSHEAVTRAALDRVRERAAAHPGARTVVLAH
TFVSGGEASDSERDLAVGGVDSVPAGVLGGIDYLALGHLHGCQDLSRTVGAPAWYSGSPL
AFSFSERNHRKSVLMVELGAPGTTAEVRRLETPVPRPLTELRGTLEEILARRDEHGGDWI
KAVVTDPARPAHLQEQLREAFPHLLLTEYAPEGREARDATPVVRREQNPLEVMDDFLAHV
TGAAPTPAEHDVLDRAYTAVRRQQEAS
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctgcacacctcggactggcacctgggccgcaccctgcacaaggtggacctg
cacgagcaccaggccgccttcctcgactggctggtcgagctggtccaggcggagcaggtc
gacgtggtcgtggtgcccggcgatgtctacgaccgcgcggtgcccgccgtgagcagcgtg
tccctgctggaccgggcgctggcccgcctcgcggacaccggcgccaccgtcgtgctcacc
tccggcaaccatgactccccggagcgtctcggcttcgggcgctcgctgatgcgggccggc
atccacctgctcaccgacgtgccggggatcgaacatcccgtcatcgtcgaggacgagcac
ggagaggtgctcttcttcggcctgccctacctcgagccggaccgtgcgcgcaccgagctg
gtcgccgagggcgagccgccgctggcccgcagccacgaggccgtcacccgtgccgccctg
gaccgcgtgcgcgagcgcgccgccgcgcatcccggcgcccgcaccgtcgtgctcgcccac
accttcgtcagcggaggcgaggcgagcgactccgagcgcgacctcgccgtcggcggcgtc
gactccgtgcccgccggggtgctcggcggcatcgactacctggccctcggccacctgcac
ggctgccaggacctctcgcgcacggtcggcgcacccgcctggtactccggctccccgctg
gccttctccttctccgagcggaaccaccgcaagtccgtgctgatggtggagctcggcgca
cccggcaccacggccgaggtgcgccgcctcgagacccccgtgccgcgtcctctcaccgag
ctgcgcggcaccctcgaggagatcctcgcccgccgcgacgagcacggcggggactggatc
aaggccgtcgtcaccgacccggcccgtcctgcccacctgcaggagcagctgcgtgaggcg
ttcccccacctgctcctgaccgagtacgcgcccgagggccgcgaggcccgggacgccacc
cccgtggtgcggcgcgagcagaacccgctggaggtgatggacgacttcctcgcccacgtc
accggagcggcacccacccctgccgagcacgacgtcttggaccgcgcctacaccgcggtg
cgccgccagcaggaggcctcgtga
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