KEGG   Brachybacterium ginsengisoli: CFK41_06830
Entry
CFK41_06830       CDS       T05099                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
bgg  Brachybacterium ginsengisoli
Brite
KEGG Orthology (KO) [BR:bgg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bgg03400]
    CFK41_06830
Enzymes [BR:bgg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CFK41_06830
    5.6.2.6  RNA 3'-5' helicase
     CFK41_06830
DNA repair and recombination proteins [BR:bgg03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CFK41_06830
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH4_Lhr DEAD WH3_Lhr WH2_Lhr Helicase_C ResIII AAA_25 Cas3-like_C_2 PhoH DUF6124
Other DBs
NCBI-ProteinID: ATG54509
UniProt: A0A291GWC8
LinkDB
Position
complement(1537544..1542238)
AA seq 1564 aa
MATTARALPSSFSPATATWFEESFDAPTPAQSAAWEAIERGDDTLVVAPTGSGKTLAAFL
TAIDSLAGRPAAPASRVVGPTSRRKRPVGSTKVLYLSPLKALGVDVERNLTSPLVGTART
AERLGIPHAPISVGVRTGDTPAAERRRLIAHPPDILITTPESLFLMLTSQARETLRGVDT
VILDEVHAVAGSKRGVHLALSLARLDALLAAPAQRIGLSATVEPVDEVASFLTGTGRARE
VTVVRPESTKRWDLTVSLPVADLQAIEPPADAVDDEDVSGTIWPHVERAVLERILAHRST
IVFTNSRSQAERLTGKLNRLHARRVAAASGDGEPGHEEAEQPEGVEDIARAHHGSMSKEV
RAGIEEQLKGGTLRCVVATSSLELGIDMGAVDLVLQVAAPMSVSSLLQRVGRAGHDVGAV
STGSLHPLHAADVLRSAVAVQEAVSGRIEPLTVPRNALDVLAQHTVSAAAMDDLQIDDWF
DLVRTAHPYRALPRSAFDQTIDLLAGRYPSTDFSELRPRLVHDHETGVLSGRPGAQRLAV
TSGGTIPDRGLYPVHLVAGDDDSQPRRVGELDEEMVYESRRGDVITLGTTSWRIEEITAS
RVTVSPAFGLSGRIPFWHGDGDGRPASLGRAIAAAQSELSSLDRAEAEEQLGALGLETNA
RTVLLDHLAEQRRATGTVPGPQQLVVERFLDELGDWRVVLHCAYGQRITGPWALAVGARV
EERYGLDGQVMAADDGIVLRIPHGEQPPGADLFVFTPEEIEEEVRRLVGSSALFAARFRE
CAARALLLPRRDPNQRSPLWQQRQRSSHLLEVARPHPDFPIMLEAARECLQDVYDLPALV
ELMTQVGRRRIEVREVETPAPSPFARSLLFGYLAQFIYDADAPLAERRTAALALDQSLLA
ELLGSVSLRELLDAEVIAEVEQRLQGLTAERALRGPEQIADTLRRLGPLPRAELARRGAE
ELDLDAALEELQRSRRILTVRLSGVEHLVAIEDAGLLRDALGTALPPGIPEAHLAPVDRA
VAQLLSRWARGRGPFPAHAPVEAFGLAPGVARGALEQLTAERVLQQGEFTPGREGEEWVD
AEVLRRIRRASLAASRKEIAPVEGPVYARFLGQWQHVAGRREDGRRGRATWHGQDGLLSV
IDQLAGVSLPLSAWESQVLPARLPDLTPAMLDAAFASGELVWTGHGRLGGDDGWVRLHLA
DALPLGLDAAALEDSADALAAGSVAARVLALLRGTPGALRHGEILTALADDGAAVAPPEL
HEALWDLAFSGLLTNDSFEVLRSYNRGSGASRTARAPARSRSLSRRGAARLSAAMMRQGV
SSVSELATGAAGAGRWSAVRVEAVDPSARSAALATLLLDRHGVVTRGAMDVEDIPGGFAA
VYRVLAVLEENGSCRRGYFVDGLGASQFAPVEAVDRLRDREREAVSEESAGAGTTLALAA
TDPANPYGAALPWPSLTILPPEGTTVRPARRAGALVLLRDGAVAAVVDRGAKHLLWWAED
ELTAEVAAQLVRAVAEDSRLPQLRIERINGHPIDAEAVASVGAALVEAGCYRSPKSIRLR
AGDR
NT seq 4695 nt   +upstreamnt  +downstreamnt
atggccacgaccgctcgggcactcccgtcgtccttctcccctgccacggcgacgtggttc
gaggagtccttcgacgcgcccacaccggcgcagtccgcggcatgggaggcgatcgagcgg
ggcgatgacacgctcgtggtcgccccgaccgggtcgggcaagacgctcgccgcgttcctc
accgcgatcgactccctcgccgggcgcccggccgcaccggcctcccgggtggtcggcccc
acctcccgccggaagcgaccggtcgggagcacgaaggtcctgtacctctccccgctcaag
gcgctcggcgtcgacgtggaacgcaacctcacctcgcccctggtgggcacggcacgcacc
gcggaacgcctcggcatcccgcacgcgccgatcagcgtgggcgtgcgcacgggcgacacc
ccggccgcggagcgccggcgcctgatcgcgcatccgccggacatcctcatcaccactccc
gagtcgctgttcctcatgctcacctcgcaggcgcgggagaccctgcgcggcgtggacacg
gtgatcctcgacgaggtgcatgcggtcgcgggctcgaagcgcggcgtgcatctggcgctc
tcgctggcccgcctcgatgccctgctcgccgcgcccgcgcagcggatcggactctcggcg
accgtggagccggtggacgaggtcgcctccttcctcaccggcaccgggcgcgcccgggag
gtcaccgtggtgcgaccggagtccaccaagcgctgggatctcacggtctcgctgccggtg
gcggacctgcaggccatcgagccgcccgcggacgcggtcgacgacgaggacgtctccggc
acgatctggccgcatgtcgagcgggctgtgctcgagcgcatcctcgcgcaccgttcgacg
atcgtcttcaccaactcccgcagccaggccgagcggctcacagggaagctgaaccggctc
cacgcgcgtcgggtcgccgccgcttcgggcgacggggaaccggggcacgaggaggcagag
cagcctgagggggtcgaggacatcgcccgcgcccaccacggctcgatgtccaaggaggtg
cgggcagggatcgaggagcagctgaagggcgggacgctgcgctgcgtggtggcgacctcc
tccctcgagctgggcatcgacatgggcgccgtggatctggtgctgcaggtcgccgccccg
atgtccgtctcgagcctgctgcagcgggtcggtcgggccgggcacgacgtcggcgccgtc
tccaccgggtcgctgcacccgctgcatgccgcggacgtgctgcgctccgcggtggcggtg
caggaggccgtctccgggcgcatcgagccgctgacggtgccgcgcaacgccctggacgtc
ctcgcccagcacaccgtctccgccgcggcgatggacgatctgcagatcgacgactggttc
gacctggtccgcaccgcccatccctaccgggcgctgccgcgctcggccttcgaccagacc
atcgacctgctcgccgggcgctacccctccaccgacttctccgagctgcggccgcgcctg
gtgcatgatcacgagaccggggtcctctctggccgccccggcgcccagcgcctcgccgtc
accagcggcggcacgatcccggatcgtgggctgtaccccgtgcacctggtcgccggggac
gacgactcccagccccgacgggtgggcgagctcgacgaggagatggtctacgagtcccgc
cgcggcgacgtgatcacgctgggcaccacgagctggcggatcgaggagatcaccgcgtca
cgggtgaccgtctccccggccttcggcctctcgggccggatcccgttctggcacggagat
ggcgacggccgccccgcgagcctcggccgggcgatcgccgccgcgcagtccgagctctcc
tccctggaccgcgccgaggcggaggagcagctcggcgccctgggcctggagacgaacgcc
cgcaccgtcctgctcgatcatctcgccgagcagcgccgggccacgggcacggtgccgggc
ccgcagcagctcgtggtggaacggttcctcgacgagctcggcgactggagggtggtgctg
cactgcgcctacgggcagcggatcaccgggccgtgggcactcgccgtcggagcgcgcgtg
gaggagcgctacggcctggacggccaggtgatggcggccgacgacgggatcgtgctgcgc
atcccccacggcgagcagccgcccggcgcggacctgttcgtgttcacgccggaggagatc
gaggaggaggtgcgccgtctcgtcggctcctccgccctgttcgccgcccggttccgggag
tgcgccgcccgcgccctgctgctgccgaggcgggacccgaaccagcgctccccgctgtgg
cagcagcgccagcgctcctcgcatctgctcgaggtggcacgaccccatcccgacttcccg
atcatgctcgaggcggcgcgcgaatgcctccaggacgtctacgaccttcctgccctcgtc
gagctcatgacgcaggtggggcggcgccgcatcgaagtgcgggaggtggagaccccggcg
ccctcccccttcgcgcgctcgctgctgttcggctacctcgcccagttcatctacgacgcc
gacgcgccgctcgccgagcgccgcaccgccgcactggcgctggaccagtcgctgctggcc
gagctgctgggctcggtgagcctgcgcgagctgctggatgccgaggtcatcgccgaggtg
gagcagcgtctccagggcctcaccgcggagcgtgccctgcgcggccccgagcagatcgcg
gacacgctgcgccggctcggcccgctcccccgcgccgagctcgcgcggcgcggggccgag
gagctcgacctcgacgcggcgctcgaggagctccagcgctcccgtcggatcctcacggtg
cgcctgtccggggtggagcacctcgtcgcgatcgaggacgccggcctgctgcgcgacgcc
ctgggcaccgcgctgccgcccgggatccccgaggcgcacctggcccccgtcgaccgcgcc
gtcgcccagctcctctcccgctgggcgaggggccgcggccccttcccggcgcatgccccg
gtggaggccttcggcctcgccccgggcgtggcacggggcgcgctcgagcagctcaccgcc
gagcgggtgctgcagcagggcgagttcactcccggccgcgagggcgaggagtgggtggat
gccgaggtgctgcgccgcatccgtcgggcgagcctcgccgcctcccgcaaggagatcgcc
cccgtcgagggtcctgtgtacgcacggttcctcggccagtggcagcatgtggcgggccgg
cgcgaggacggccgacggggccgcgcgacctggcacggccaggacggcctgctctcggtg
atcgaccagctcgccggggtctcgctgccgctgtccgcctgggagtcgcaggtgctgccg
gcccggctgccggacctgacccccgcgatgctcgatgccgccttcgcctccggcgagctg
gtgtggaccgggcacggacggctgggcggggacgacggctgggtccggctccatctcgcc
gacgcgctgccgctcgggctcgacgccgccgcgctcgaggactccgctgacgcactggcc
gcggggtcggtcgccgcgcgcgtgctggccctgctgcgcgggacgcccggggcgctgcgt
cacggcgagatcctcaccgccctggcggacgacggcgcggcggtcgccccgccggagctg
cacgaggcactgtgggacctcgccttctccgggctgctgaccaacgactccttcgaggtg
ctgcggtcctacaaccggggctctggagcctcccgcaccgcgcgggccccggcgcgctcg
cgatcgctgtcccgtcgcggtgccgcacgactgtccgcggcgatgatgcgacagggggtc
tcctccgtctccgagctcgcgaccggcgcggccggggcaggcaggtggtccgcggtgcgg
gtcgaggccgtggatccctcggcgcggtccgcggcgctcgccaccctgctcctggaccgg
cacggggtcgtcacccgcggcgcgatggacgtggaggacatccccgggggcttcgccgcc
gtctaccgggtgctcgcggtgctcgaggagaacggcagctgccgccgcggctacttcgtg
gacgggctgggggcctcgcagttcgccccggtcgaggccgtggaccggctccgcgaccgg
gagcgggaggccgtgagcgaggagtccgccggtgccgggaccaccctcgccctcgcggcg
acggatccggcgaacccctacggcgccgccctgccctggccgtcgctgacgatcctgccg
cccgagggcaccacagtgaggcccgcccgccgggccggagccctcgtgctgctgcgcgac
ggcgcggtcgcggccgtggtggatcggggggcgaagcacctgctgtggtgggcggaggac
gagctgaccgccgaggtcgccgcgcagctggtgcgcgcggtcgctgaggactcccgactc
ccccagctgcggatcgagcggatcaacggccatccgatcgacgccgaggcggtcgcgtcg
gtcggcgccgccctggtggaggccggctgctaccgctccccgaagtcgatccgcctgcgc
gcaggagaccgctga

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